We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7KI6 | 2021 | 12 |
| 3ENK | 2008 | 12 |
| 3IXC | 2009 | 12 |
| 3K2H | 2009 | 11 |
| 4H51 | 2012 | 11 |
| 4LSM | 2013 | 11 |
| 3GKA | 2009 | 11 |
| 3H7F | 2009 | 11 |
| 4IUJ | 2013 | 11 |
| 4G6C | 2012 | 11 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 6xdh | - | https://www.cell.com/structure/pdf/S0969-2126(22)00495-6.pdf | Room-temperature structural studies of SARS-CoV-2 protein NendoU with an X-ray free-electron laser | 2023 | RJ Jernigan, D Logeswaran, D Doppler, N Nagaratnam- Structure, 2023 - cell.com | using the crystal structure of NendoU PDB entry 6XDH as the search model (Dranow et al., unpublished results) with all solvent and ligand atoms removed. The structure was refined |
| 2 | 3o0m | 3oj7, 3r6f, 3lb5 | https://udspace.udel.edu/items/40e2c554-f9dc-43a9-bb93-b6dd5914e73c | Potential Binding Partners of cADPR and cADPR isomers in the Thoeris Phage Defense System | 2023 | N Bomasamudram - 2023 - udspace.udel.edu | structures , and they differ based on their Cterminus. The structures of categorized Hint structures hydrocarbonoclasticus (3OHE), and Mycolicibacterium smegmatis ( 3O0M ). Type III Hint |
| 3 | 7so9 | - | https://www.nature.com/articles/s41421-023-00535-1 | Comprehensive structural analysis reveals broad-spectrum neutralizing antibodies against SARS-CoV-2 Omicron variants | 2023 | X Chi, L Xia, G Zhang, X Chi, B Huang, Y Zhang- Cell Discovery, 2023 - nature.com | with multiple structures , we selected the subcomplex deposited earliest in the PDB database ID: 7SO9 ) were manually refined based on the focused-refined cryo-EM map. Each residue |
| 4 | 5u26 | - | https://www.sciencedirect.com/science/article/pii/S0223523423003756 | Comprehensive coverage on anti-mycobacterial endeavour reported during 2022 | 2023 | TM Dhameliya, DD Vekariya, HY Patel- European Journal of, 2023 - Elsevier | reported in 2022 with their mechanism of action, structure activity relationships, along with the key Further, molecular docking revealed compound 76 inhibiting DHFR ( PDB : 5U26 ) and |
| 5 | 6tys | 7ki6, 7ki4 | https://www.nature.com/articles/s41467-023-39278-8 | Structure and antigenicity of divergent Henipavirus fusion glycoproteins | 2023 | A Isaacs, YS Low, KL Macauslane, J Seitanidou- Nature, 2023 - nature.com | -EM structures from this work also display clear fusion peptide loop densities, which were only previously seen in structures determined by X-ray crystallography for NiV F ( PDB 5EVM & |
| 6 | 3f0d | 3mx6 | https://search.proquest.com/openview/9fc8f0354d4ba3af48825fe7f30af8ee/1?pq-origs... | Identification of Rickettsia Prowazekii Methionine aminopeptidase Inhibitors and Development of Thermal Shift assays for Burkholderia Pseudomallei Ispf and Sars | 2023 | I Sharma - 2023 - search.proquest.com | (Figure 1.12) reveals the `pita-bread' fold with a large cavity primarily formed by the inner surface of the central betabarrel ( PDB ID: 3MX6).This cavity holds the active site (Figure 1.17A); |
| 7 | 6n41 | - | https://repositorio.unal.edu.co/handle/unal/85425 | Anlisis computacional de la hemaglutinina de los virus influenza A de linaje pandmico en Colombia | 2023 | JA suga Restrepo - repositorio.unal.edu.co | The last two chapters corresponded to the structural analysis of HA and its interaction with ), representative of its cluster, showed structural changes in the loop130 of receptor binding |
| 8 | 6tys | - | https://www.nature.com/articles/s41467-023-36995-y | Structural basis for antibody recognition of vulnerable epitopes on Nipah virus F protein | 2023 | PO Byrne, BE Fisher, DR Ambrozak, EG Blade- Nature, 2023 - nature.com | The initial model for NiV F was PDB ID 6TYS . Homology models for the Fabs were generated using ABodyBuilder 66 . Initial models were docked into the cryo-EM maps using Chimera. |
| 9 | 6tz8 | - | https://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1011056 | Natural product ligands of FKBP12: Immunosuppressive antifungal agents FK506, rapamycin, and beyond | 2023 | A Rivera, J Heitman- PLoS pathogens, 2023 - journals.plos.org | adapted from Harnessing calcineurin-FK506-FKBP12 crystal structures from invasive fungal pathogens to develop antifungal agents ( PDB 6TZ8 ) [3]. The original figure was published |
| 10 | 4y0v | - | https://febs.onlinelibrary.wiley.com/doi/abs/10.1002/1873-3468.14560 | The structure of COPI vesicles and regulation of vesicle turnover | 2023 | RJ Taylor, G Tagiltsev, JAG Briggs- FEBS letters, 2023 - Wiley Online Library | of COPI coat protein structure , we describe how structural and biochemical studies (A) The structure of GDP-bound Arf1 ( PDB 4Y0V ) and GTPbound Arf1 ( PDB 1O3Y). GTP/GDP binding |