We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5IHV | 2016 | 1 |
| 7SOD | 2022 | 1 |
| 7SYC | 2021 | 1 |
| 5TEW | 2016 | 1 |
| 5U8P | 2017 | 1 |
| 5UXW | 2018 | 1 |
| 5UZH | 2017 | 1 |
| 6XEP | 2020 | 1 |
| 7KF3 | 2020 | 1 |
| 5W7Z | 2017 | 1 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4xgi | - | https://thesis.library.caltech.edu/9538/ | Engineering, Predicting, and Understanding Nicotinamide Cofactor Specificity | 2016 | JKB Cahn - 2016 - thesis.library.caltech.edu | geometries between homologues,11,12 and this structural diversity has limited the development of general methods PDB accession code use the cofactor from that protein and (m) denotes a structure of a mutant protein |
| 2 | 6q06 | - | https://academic.oup.com/femsre/advance-article-abstract/doi/10.1093/femsre/fuaa... | Molecular diversity of coronavirus host cell entry receptors | 2020 | JK Millet, JA Jaimes, GR Whittaker- FEMS microbiology reviews, 2020 - academic.oup.com | boxes indicate genes encoding accessory proteins (ns2, ns4a, ns4b and ns5a), while green boxes indicate structural proteins B) Representative structure of coronavirus protein in pre-fusion (S1 and S2 subunits, PDB 3JCL) and post-fusion (S2 subunit, PDB 6B3O) conformations ...MERS-CoV NTD (PDB 6Q06), which binds sialosides with a preference for α2,3-linked sialic acids, |
| 3 | 4nbr | - | https://onlinelibrary.wiley.com/doi/abs/10.1107/S2059798318005612 | MRREX: molecular replacement by cooperative conformational search and occupancy optimization on lowaccuracy protein models | 2018 | JJ Virtanen, Y Zhang- Acta Crystallographica Section D, 2018 - Wiley Online Library | et al., 2016, 2017; Shrestha & Zhang, 2015), MR-REX takes advan- tage of this fact by predicting possible inaccurate segments of the structural model and Input and output data The input to MR-REX is a set consisting of structure -factor data, a structure file in PDB format and |
| 4 | 4h3e | - | http://www.publish.csiro.au/ch/ch19346 | The Crystal Structure of the Manganese Superoxide Dismutase from Geobacillus stearothermophilus: Parker and Blake (1988) Revisited | 2020 | JJ Adams, CJ Morton, MW Parker- Australian Journal of Chemistry, 2020 - CSIRO | determined primarily by X-ray crystallography, although one SOD structure has been SODs have also been determined from Pseudomonas putida (ovalis) ( PDB ID: 1dto acidocaldarius (1b06), [ 27 ] Acanthamoeba castellanii (6j55), [ 28 ] Trypanosoma cruzi ( 4h3e ), [ 29 ] Vigna |
| 5 | 6aqz | - | https://onlinelibrary.wiley.com/doi/abs/10.1002/prot.26080 | Crystal structure of a GDP6OMe4ketoLxyloheptose reductase from Campylobacter jejuni | 2021 | JH Kim, A Hofmann, JS Kim- Proteins: Structure, Function, and, 2021 - Wiley Online Library | Page 9. Discussion Comparison with other related proteins The crystal structure of Camylobacter MlghC revealed a two-domain architecture commonly found in 36.7; rmsd 1.9 ) and Naegleria fowleri ( PDB ID 6AQZ ; Z-score 34.3; rmsd 2.3 ), and GDP-4-keto-6 |
| 6 | 4pq9 | - | http://www.sciencedirect.com/science/article/pii/S0959440X14000815 | A sweet new wave: structures and mechanisms of enzymes that digest polysaccharides from marine algae | 2014 | JH Hehemann, AB Boraston, M Czjzek - Current opinion in structural , 2014 - Elsevier | ... CAZy family, Protein, PDB codes. GH16, -Carrageenase (Pseudoaltermonas carragenovora), 1DYP. -Agarase ... -Porphyranase B (Zobellia galactanivorans), 3JUU. -1,3-Glucanase (Mycobacterium marinum M), 4PQ9. Laminarinase (Thermotoga ... |
| 7 | 4kna | - | http://aem.asm.org/content/early/2017/04/03/AEM.00018-17.abstract | Characterization of five fatty aldehyde dehydrogenase enzymes from Marinobacter and Acinetobacter: structural insights into the aldehyde binding pocket | 2017 | JH Bertram, KM Mulliner, K Shi - Applied and , 2017 - Am Soc Microbiol | ... Furthermore, we 70 selected one enzyme for structural studies, and here report the ... The closest homologous structures currently available are 4KNA (N-succinylglutamate 5-semialdehyde dehydrogenase from Burkholderia thailandensis) and 3JU8, with amino acid sequence identity of 63% and 62% respectively. ... |
| 8 | 4kna | - | http://aem.asm.org/content/83/12/e00018-17.short | Five Fatty Aldehyde Dehydrogenase Enzymes from Marinobacter and Acinetobacter spp. and Structural Insights into the Aldehyde Binding Pocket | 2017 | JH Bertram, KM Mulliner, K Shi - Applied and , 2017 - Am Soc Microbiol | ... The closest homologous structures currently available are those reported under PDB accession no. 4KNA (N-succinylglutamate 5-semialdehyde dehydrogenase from Burkholderia thailandensis) and 3JU8, with amino acid sequence identities of 63% and 62%, respectively. ... |
| 9 | 3hgb | - | http://www.sciencedirect.com/science/article/pii/S1097276515004529 | Identification of a Class of Protein ADP-Ribosylating Sirtuins in Microbial Pathogens | 2015 | JGM Rack, R Morra, E Barkauskaite, R Kraehenbuehl… - Molecular cell, 2015 - Elsevier | ... SpyGcvH-L structure is shown in black and canonical GcvH of cattle (PDB: 3KLR), pea (PDB: 1DMX), and M. tuberculosis (PDB: 3HGB) in orange, green, and yellow, respectively. Residue numbers for GcvH-L are given. ... |
| 10 | 3ke1 | - | http://onlinelibrary.wiley.com/doi/10.1002/cmdc.201000083/full | Thiazolopyrimidine Inhibitors of 2‐Methylerythritol 2, 4‐Cyclodiphosphate Synthase (IspF) from Mycobacterium tuberculosis and Plasmodium falciparum | 2010 | JG Geist, S Lauw, V Illarionova, B Illarionov, et al. ChemMedChem (2010) 5:1092-1101 | ...[11] T.E. Edwards, D.R. Davies, R. Hartley, W. Zeller, unpublished results. PDB code: 3KE1.... |