We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6CAZ | 2018 | 1 |
| 6CK0 | 2018 | 1 |
| 6CK7 | 2018 | 1 |
| 6CUQ | 2018 | 1 |
| 6D46 | 2018 | 1 |
| 6D47 | 2018 | 1 |
| 6DEG | 2018 | 1 |
| 6DLY | 2019 | 1 |
| 6DM6 | 2019 | 1 |
| 4ZBG | 2015 | 1 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 7l6c | - | https://pubs.acs.org/doi/abs/10.1021/acsabm.5c00927 | N-(Arylcarbamothioyl)benzamide Derivatives as Selective Antimycobacterial Agents and Their Supramolecular Structural Features | 2025 | AD Mahapatra, P Kambhale, P Malik, J Ali- ACS Applied Bio, 2025 - ACS Publications | structure of enoyl-acyl carrier protein reductase (InhA; PDB ID , the cocrystallized ligand ( PDB ID 5OIL) was redocked into abscessus ( PDB ID 7L6C ; resolution 1.85 ) possessing 88.1 |
| 2 | 5vwm | - | https://www.sciencedirect.com/science/article/pii/S0968089620306568 | N-Hydroxyformamide LpxC inhibitors, their in vivo efficacy in a mouse Escherichia coli infection model, and their safety in a rat hemodynamic assay | 2020 | T Furuya, AB Shapiro, J Comita-Prevoir- Bioorganic & Medicinal, 2020 - Elsevier | Fig. 2. Key interactions in the LpxC enzyme binding pocket observed in P. aeruginosa LpxCCHIR-090 (3) co-crystal structure ( PDB code: 5VWM ). We first implemented a docking model using the ICM-Pro software (Molsoft) based on the available co-crystal structures of P |
| 3 | 6mb1 | 6mb0, 6may, 6maz | https://spiral.imperial.ac.uk/handle/10044/1/85451 | N-myristoyltransferase inhibitor binding mode and phenotype in the malarial parasite. | 2019 | AC Schlott - 2019 - spiral.imperial.ac.uk | lacks myristoylation and instead contains a hydro- phobic N-terminal sequence interacting with the Golgi membrane; its location resembles the distribution of GRASP1, but its structure may result 2010) N-Myristoyltransferase from Leishmania donovani: Structural and Functional ... One of them is the aminomethylindazole series including compounds IMP-0917 (PDB: 5O6H) (Mousnier et al. 2018), and IMP-1002 (PDB: 6MB1) (Schlott et al. 2019) |
| 4 | 6q04 | 6VXX | https://www.researchsquare.com/article/rs-37300/latest.pdf | N-terminal domain (NTD) of SARS-CoV-2 spike-protein structurally resembles MERS-CoV NTD sialoside-binding pocket | 2020 | M Awasthi, S Gulati, DP Sarkar, S Tiwari, S Kateriya - 2020 - researchsquare.com | W program [14]. Structure preparation The cryo-EM structures of SARS-CoV-2 ( PDB ID: 6VXX) [8] and MERS-CoV ( PDB ID: 6Q04 ) [10] spike spike glycoprotein (YP_009724390. 1) was strongly biased on the crystal structure of SARS-CoV-2, while |
| 5 | 4xk1 | - | https://www.sciencedirect.com/science/article/pii/S014181301930755X | N-terminal residues are crucial for quaternary structure and active site conformation for the phosphoserine aminotransferase from enteric human parasite E. histolytica | 2019 | RK Singh, P Tomar, S Dharawat, S Kumar- International journal of, 2019 - Elsevier | 3. Comparative analysis, using the RAPIDO server, of PSAT structures from various organisms with the EhPSAT structure . PDB IDs, Sequence identity (%), RMSD with EhPSAT monomer in (number of residues compared) 4XK1 (P. aeruginosa) [38], 40, 1.52 (for 337 residues) |
| 6 | 4l82 | - | http://www.sciencedirect.com/science/article/pii/S1570963917302121 | N-terminus determines activity and specificity of styrene monooxygenase reductases | 2017 | T Heine, A Scholtissek, AH Westphal- et Biophysica Acta (BBA, 2017 - Elsevier | ... Here, PheA2 ( PDB ID: 1RZ1), HpaC (2D36), CobR (4IRA) and a putative oxidoreductase from Rickettsia felis ( 4L82 ) served as the structural templates [5,4547] and an iterative approach was used with Modeller Software 9.14 [48] to compute a RoStyBart model- structure . 2.4. ... |
| 7 | 5unb | - | https://www.biorxiv.org/content/early/2018/11/06/463554.abstract | NEPRE: a Scoring Function for Protein Structures based on Neighbourhood Preference | 2018 | S Liu, X Xiang- bioRxiv, 2018 - biorxiv.org | Based on the testing results and the comparison with several other structure assessment methods, we report that the neighborhood structural correctness. MATERIALS AND METHODS composed of 14,647 PDB structures , which were selected from the NCBI VAST (the vector |
| 8 | 3kre | - | http://www.freepatentsonline.com/y2019/0209493.html | NOVEL APPLICATIONS OF SPERMINE AND DERIVATIVES THEREOF | 2019 | W Pan, W Zhu- US Patent App. 16/334,273, 2019 - freepatentsonline.com | Thermotoga maritime (1KUT), Clostridium perfringens (3NUA), Ehrlichia chaffeensis ( 3KRE ), Geobacillus kaustophilus On the basis of the above results, the crystal structure conformations in of Saccharormyces cerevisiae ( PDB : 2CNQ) and Escherichia coli ( PDB : 2GQS) are |
| 9 | 2khp | - | http://rave.ohiolink.edu/etdc/view?acc_num=akron1524681449524557 | NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY IN THE STUDY OF PROTEIN-LIGAND INTERACTIONS | 2018 | DL Morris - 2018 - rave.ohiolink.edu | Structures of target proteins were obtained from the Protein Data Bank (PDB). The PBD code for BrmGRX is 2KHP and hGRX1 is 1JHB. |
| 10 | 5dvw | - | https://core.ac.uk/download/pdf/323470394.pdf | Napovedni modeli za identifikacijo potencialnih inhibitorjev razlinih proteinov virusa ebole | 2020 | V Hudi - 2020 - core.ac.uk | Monte Carlo MLR Multivariatna linearna regresija mRNA Informacijska ribonukleinska kislina NP Nukleoprotein PCA Metoda glavnih komponent PDB Podatkovna knjinica Knowledge of the viral structure gives us insight into the functioning of the virus and allows us to predict |