We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6ONA | 2019 | 7 |
| 6ONN | 2019 | 0 |
| 6OR9 | 2019 | 0 |
| 6OSR | 2019 | 2 |
| 6OTE | 2019 | 4 |
| 6OTJ | 2019 | 0 |
| 6OTU | 2019 | 1 |
| 6OVI | 2019 | 1 |
| 6OZD | 2019 | 1 |
| 6P61 | 2019 | 4 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4h51 | 4w5k, 3meb | http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0158402 | Structural Insights into a Novel Class of Aspartate Aminotransferase from Corynebacterium glutamicum | 2016 | HF Son, KJ Kim - PloS one, 2016 - journals.plos.org | ... A) RMSD of reported AspAT structures were analyzed. PDB code 1SPA; Escherichia coli, 7AAT; Gallus gallus (cytosolic), 2CST; Gallus gallus (mitochondrial), 3PD6; Mus musculus, 4W5K; Trypanosoma brucei, 1AJR; Sus scrofa, 3MEB; Gaiardia lamblia, 1YAA; Saccharomyces cerevisiae, 4H51; Leishmania major, 3K7Y; Plasmodium falciparum, ... |
| 2 | 4h51 | - | http://www.sciencedirect.com/science/article/pii/S0166685115300311 | Structural basis for the relaxed substrate selectivity of Leishmania mexicana broad specificity aminotransferase | 2015 | J Wen, C Nowicki, W Blankenfeldt - Molecular and biochemical , 2015 - Elsevier | ... The most similar structure, however, is that of a putative aspartate aminotransferasefrom Leishmania major Friedlin (LmajASAT, PDB entry 4H51 [16]), which was notavailable when we first determined the structure of LmexBSAT. ... |
| 3 | 4h51 | - | http://cz.oxfordjournals.org/content/early/2016/05/03/cz.zow044.abstract | Mitochondrial selfish elements and the evolution of biological novelties | 2016 | L Milani, F Ghiselli, M Passamonti - Current Zoology, 2016 - cz.oxfordjournals.org | ... and to better show the structure of both male and female acinus (ie, the structural unit of ... The tertiarystructure of RPHM21 and RPHF22 was predicted using I-TASSER (http://zhanglab.ccmb.med ...The best model in pdb format was used as input for the Chimera 1.8.1 software ... |
| 4 | 4hec | - | http://www.sciencedirect.com/science/article/pii/S0969212614000744 | Structure and Function of RNase AS, a Polyadenylate-Specific Exoribonuclease Affecting Mycobacterial Virulence In Vivo | 2014 | M Romano, R van de Weerd, FCC Brouwer - Structure, 2014 - Elsevier | ... Structural features of the enzyme resemble those of an independently determined structure reported in the Protein Data Bank while our functional characterization was ongoing (PDB code 4HEC) (Abendroth et al., 2014). ... |
| 5 | 4hjh | 3uw2 | http://www.sciencedirect.com/science/article/pii/S1876162317300366 | Biology, Mechanism, and Structure of Enzymes in the -d-Phosphohexomutase Superfamily | 2017 | KM Stiers, AG Muenks, LJ Beamer - in Protein Chemistry and Structural , 2017 - Elsevier | ... Enzymes in the α-d-phosphohexomutases superfamily catalyze the reversible conversion of phosphosugars, such as glucose 1-phosphate and glucose 6-phosphate. These reactions are fundamental to primary metabolism across the kingdoms of life and are required for a myriad of cellular processes, ... |
| 6 | 4hjh | - | https://www.mdpi.com/1422-0067/21/24/9341 | Genomic Analysis of Natural Rough Brucella melitensis Rev. 1 Vaccine Strains: Identification and Characterization of Mutations in Key Genes Associated with | 2020 | D Kornspan, R Lubkovskaia, S Mathur- International journal of, 2020 - mdpi.com | through all homologs (Figure 2A). To evaluate the possible effect of the detected mutation on protein functionality, we conducted a structural analysis of the amino acid sequence of GST based on the solved 3D structure of this protein from Sinorhizobium meliloti ( PDB ID 4MDC) ... we conducted a structural analysis of the amino acid sequence of phosphomannomutase based on the solved 3D structure of its paralog phosphoglucomutase (PDB ID 4HJH, |
| 7 | 4hr2 | - | https://www.nature.com/articles/s41594-020-00530-0 | Structures of radial spokes and associated complexes important for ciliary motility | 2021 | M Gui, M Ma, E Sze-Tu, X Wang, F Koh- Nature Structural &, 2021 - nature.com | In motile cilia, a mechanoregulatory network is responsible for converting the action of thousands of dynein motors bound to doublet microtubules into a single propulsive waveform. Here, we use two complementary cryo-EM strategies to determine structures of the major |
| 8 | 4hvt | 3s6m, 5tnx | https://pubs.acs.org/doi/abs/10.1021/acs.jcim.8b00777 | SPOT-peptide: Template-based prediction of peptide-binding proteins and peptide-binding sites | 2019 | T Litfin, Y Yang, Y Zhou- Journal of chemical information and, 2019 - ACS Publications | test set taken from another structure -based peptide-binding site predictor, SPRINT- peptide11 Structural genomics targets (SG4444) 11,813 proteins involved in structural genomics studies were collected from the PDB plate primarily based on domain-level structural similarity |
| 9 | 4hvt | - | https://pubs.acs.org/doi/abs/10.1021/acs.biochem.9b00031 | Crystal Structure and Conformational Dynamics of Pyrococcus furiosus Prolyl Oligopeptidase | 2019 | K Ellis-Guardiola, H Rui, RL Beckner, P Srivastava- Biochemistry, 2019 - ACS Publications | Crystal Structure and Conformational Dynamics of Pyrococcus furiosus Prolyl Oligopeptidase While extensive structural characterization of bacterial and mammalian POPs has been performed, no structures for archaeal POPs have been reported |
| 10 | 4hvt | - | https://chemrxiv.org/ndownloader/articles/7053812/versions/1/export_pdf | Pyrococcus furiosus Prolyl Oligopeptidase: A Dynamic Supramolecular Host for Peptidase and Dirhodium Catalysis | 2018 | K Ellis-Guardiola, H Rui, R Beckner, P Srivastava - 2018 - chemrxiv.org | both Pfu POP and the S447C mutant possess a two-domain architecture involving a peptidase domain reported homology model; M. xanthus chain A from 2BKL; R. typhi from 4HVT ; S. Scrofa from 1QFS; H. Page 17 S1). The structure of |