We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7KLI | 2020 | 1 |
| 5JYD | 2016 | 1 |
| 6NMO | 2020 | 1 |
| 6B4P | 2017 | 1 |
| 6O5D | 2019 | 1 |
| 6MTZ | 2018 | 1 |
| 7KM7 | 2021 | 1 |
| 6OEW | 2019 | 1 |
| 3G87 | 2009 | 1 |
| 6OZD | 2019 | 1 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4g50 | - | https://opus.bibliothek.uni-wuerzburg.de/opus4-wuerzburg/files/13482/Seufert_Flo... | Entwicklung von Inhibitoren des macrophage infectivity potentiator -Proteins | 2016 | F Seufert - opus.bibliothek.uni-wuerzburg.de | ... Zur Evaluierung möglicher struktureller Verbesserungen von S-1a wurden auch für BpMip Hot- Spot- und Docking-Analysen von M. Hein und M. Kuhn vorgenommen. Dazu wurden die Strukturen PDB 4G50 bzw. 4GGQ75 für BpMip und 2VCD-4 für LpMip verwendet.. ... |
| 2 | 3ek2 | - | https://opus.uni-wuerzburg.de/opus4-wuerzburg/files/7086/Thesis_MariaHirschbeck_... | Structure-based drug design on the enoyl-ACP reductases of Yersinia pestis and Burkholderia pseudomallei | 2012 | MW Hirschbeck - opus.uni-wuerzburg.de | ... In the PDB database an apo structure of BpFabI had already been deposited (PDB code 3EK2), which was crystallized in 10% PEG 6000 and 100 mM HEPES pH 7.0. ... |
| 3 | 5unb | - | https://ora.ox.ac.uk/objects/uuid:bd3dc30e-2835-45d8-b1ba-dafa2f552e98/download_... | Janus kinase inhibition for autoinflammation in DNASE2 deficiency | 2019 | S Nanthapisal, A Cavounidis, H Takeshita- Journal of Allergy and, 2019 - ora.ox.ac.uk | Structural modeling Structural models and figures were prepared by using the ICM software package (MolSoft, San Diego, Calif). A homology model for human DNase II was prepared by using the existing structure from B thailandensis ( PDB 5UNB ) as the model template |
| 4 | 6pqh | - | https://orca.cf.ac.uk/138637/1/2021HanadiAsiriPhD.pdf | Development of Novel Antibacterial Agents through the Design and Synthesis of Aminoacyl tRNA Synthetase (AaRS) Inhibitors | 2020 | H Asiri, C Simons, E Mantzourani - 2020 - orca.cf.ac.uk | 33 Figure 16: Chemical structures of LysRS and AspRS inhibitors. 34 Figure 17: Chemical structures of AsnRS and AlaRS inhibitors. 34 Figure 21: 3D structure of Thermus thermophilus AsnRS ( pdb : 5ZG8) with two-8 amino acid residues gaps (161-168 and 209-216) identified. Table 7. Elizabethkingia anopheles 6PQH |
| 5 | 5v6d | - | https://papers.ssrn.com/sol3/papers.cfm?abstract_id=3188389 | A Centipede Toxin Family Defines a New Ancient Class of CS Defensins | 2018 | TS Dash, T Shafee, PJ Harvey, C Zhang- Available at SSRN, 2018 - papers.ssrn.com | structure of Sm2 against all structures of proteins contained within the Protein Data Bank ( PDB ) that are composed of more than 30 amino acids Thus, the minimal cysteine motif is by itself sufficient to generate a stable CS structure . Although the 2ds-CS architecture has |
| 6 | 6bfu | 6nb6, 6nb7, 6nb3, 6tys, 6q04 | https://papers.ssrn.com/sol3/papers.cfm?abstract_id=3541361 | Candidate targets for immune responses to 2019-Novel Coronavirus (nCoV): sequence homology-and bioinformatic-based predictions | 2020 | A Grifoni, J Sidney, Y Zhang- -HOST-MICROBE-D, 2020 - papers.ssrn.com | with data about immune epitopes, protein structures , and host responses to virus infections (Pickett et al., 2012) glycoprotein structure ( PDB : 6ACD). The calculated surface of the top 10 amino acid residues Non- structural protein 3b 2 0 Protein 7a 2 0 Protein 9b 2 0 |
| 7 | 4nps | 4yk1 | https://papers.ssrn.com/sol3/papers.cfm?abstract_id=4109528 | Full-Length Structure of the Host Targeted Bacterial Effector Bep1 Reveals a Novel Structural Domain Conserved in FIC Effector Proteins From Bartonella | 2024 | M Huber, A Wagner, J Reiners, CEM Seyfert, T Sharpe - papers.ssrn.com | the full-length structure of Bep1 from Bartonella clarridgeiae as the first complete structure of a Bep- In addition to our full-length Bep1 structure , that shows the insertion of the structural |
| 8 | 3lnc | - | https://papers.ssrn.com/sol3/papers.cfm?abstract_id=4631842 | Zno-S. Cerevisiae: An Effective Growth Promoter of Astragalus Memeranaceus and Nano-Antibacterial Agent Against Fusarium Oxysporum by Improving Trifolirhizin | 2023 | Y Su, W Yang, R Wang, H Zhang, J Meng- Available at SSRN - papers.ssrn.com | 3D crystal structures were imported into , PDB ID: 3o7q was selected for MFS transporter, guanylate kinase based 607 on PDB ID: 3lnc , sedoheptulose-bisphosphatase based on PDB |
| 9 | 5vwm | 6ote, 6pth, 6cfp | https://papers.ssrn.com/sol3/papers.cfm?abstract_id=4633401 | Unveiling Success Determinants for Amb-Assisted Phase Expansion of Fusion Proteins in Arp/Warp | 2023 | MC Cardona-Echavarra, C Santilln - papers.ssrn.com | In this study, the PDB was mined to obtain an up-to-date list of the FP crystallographic 103 structures of the most used protein tags: maltose binding protein (MBP), thioredoxin (TRX), |
| 10 | 5t8t | - | https://papers.ssrn.com/sol3/papers.cfm?abstract_id=4651464 | Characterization of a Plant S-Adenosylmethionine Synthetase from Acacia Koa | 2023 | D Borthakur, JT Carrillo- Available at SSRN 4651464 - papers.ssrn.com | structural 8 changes due to mutagenesis (Fig. 8). Species name and PDB numbers of the 9 structures Neisseria gonorrhoeae ( 5T8T ), Lactiplantibacillus plantarum (7R3B). From eukarya |