We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7LYD | 2021 | 1 |
| 7LYY | 2021 | 1 |
| 7M2D | 2021 | 1 |
| 7SL5 | 2022 | 1 |
| 7SSQ | 2023 | 1 |
| 7SWK | 2021 | 1 |
| 7SY9 | 2021 | 1 |
| 6XR5 | 2020 | 0 |
| 6X9F | 2020 | 0 |
| 9YMM | 2025 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4qhq | - | http://www.degruyter.com/dg/justaccepted.articlelist.resultlinks.fullcontentlink... | The contribution of methionine to the stability of the Escherichia coli MetNIQ ABC transporter-substrate binding protein complex. | 2015 | PT Nguyen, QW Li, NS Kadaba, JY Lai, JG Yang… - Biological …, 2015 - degruyter.com | ... structures with PDB entries 3TQW, 3UP9, 4EF1, 4GOT, 4IB2, 4K3F, 4QHQ, 4QYM, and 4Q5T. ...2008) that was in turn solved by molecular replacement from PDB entry 1P99 (Williams et al.,2004), a Gly-Met-binding protein. ... Coordinates and structure factors have been ... |
| 2 | 3rqi | - | http://pubs.acs.org/doi/full/10.1021/bi301004v | A Predicted Structure for the PixD-PixE Complex Determined by Homology Modeling, Docking Simulations, and a Mutagenesis Study | 2013 | S Ren, R Sato, K Hasegawa, H Ohta, S Masuda - Biochemistry, 2013 - ACS Publications | ... PixE Homology Modeling The amino acid sequence of PixE was obtained from the DNA DataBank of Japan (entry ... were bacterial response regulators (best 20 defined as those with the smallest E values; PDB entries 3LUF, 3N0R, 3GT7, 1QKK, 3KHT, 3RQI, 2ZQT, 2QZJ ... |
| 3 | 6bfu | - | https://journals.asm.org/doi/abs/10.1128/JVI.02284-20 | Insight into Vaccine Development for Alphacoronaviruses Based on Structural and Immunological Analyses of Spike Proteins | 2021 | Y Shi, J Shi, L Sun, Y Tan, G Wang, F Guo- Journal of, 2021 - Am Soc Microbiol | (B) Overall structure comparison of coronavirus S-trimers. The S-trimer structures of HCoV-229E ( PDB ID: 6U7H), HCoV-NL63 ( PDB ID: 5SZS), PEDV ( PDB ID: 6U7K), FIPV ( PDB ID: 6JX7), PDCoV ( PDB ID: 6BFU ), IBV ( PDB ID: 6CV0), SARS-CoV ( PDB ID: 5X5B), SARS |
| 4 | 4dz4 | - | http://etheses.whiterose.ac.uk/id/eprint/20114 | Characterising two genomic islands involved in metabolism in Neisseria meningitidis | 2017 | AJ Chu - 2017 - etheses.whiterose.ac.uk | Figure 3.1-1 Simplified chemical structures of polyamines ----- 47 characterisation of the meningococcal pili structure demonstrates the organism's 135, X, Y, Z and 29E were duly classified based on structural variations in capsular |
| 5 | 4djt | - | http://link.springer.com/chapter/10.1007/978-3-7091-1806-1_2 | The Structure of the G Domain of the Ras Superfamily | 2014 | IR Vetter - Ras Superfamily Small G Proteins: Biology and …, 2014 - Springer | ... series) (24 PDB files, 31 chains). ... The structure of an orthologue of Ran from Encephalitozooncuniculi (4djt, unpublished) has all GTP-interacting motifs including the catalytic glutamineconserved. It was crystallized in the GDP-bound form. ... Structure/Fold Des 15(12):1618–1629. |
| 6 | 3gwc | - | https://www.sciencedirect.com/science/article/pii/S0006349520308894 | Mechanism of naphthoquinone selectivity of thymidylate synthase ThyX | 2020 | H Myllykallio, HF Becker, A Aleksandrov- Biophysical Journal, 2020 - Elsevier | to be very small, less than 0.1 kcal mol 1 . To model C8-C1 in complex with ThyX from Mtb, the C8-C1 ligand from the crystal structure from PBCV-1 was retained after superimposing the crystal structures from ThyX and PBCV-1( PDB : 4FZB, 3GWC ) using the |
| 7 | 3meq | - | http://scripts.iucr.org/cgi-bin/paper?tt5041 | Structure of Escherichia coli AdhP (ethanol-inducible dehydrogenase) with bound NAD | 2013 | LM Thomas, AR Harper, WA Miner? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2013 - scripts.iucr.org | ... 2007). J. Appl. Cryst. 40, 658-674.] ). The structure of Brucella melitensis alcohol dehydrogenase (PDB entry 3meq ; Seattle Structural Genomics Center for Infectious Disease, unpublished work) was used as the initial model. The ... |
| 8 | 3nfw | - | http://www.sciencedirect.com/science/article/pii/S0944501316301549 | Biochemical properties and crystal structure of the flavin reductase FerA from Paracoccus denitrificans | 2016 | V Sedlek, T Klumpler, J Marek, I Kuera - Microbiological Research, 2016 - Elsevier | ...Sequence and structural comparisons of FerA with a flavin reductase like domain protein family (PF01613). 3NFW E5Q9D7 NmoB Mycobacterium thermoresistibile ... |
| 9 | 3d6b | - | http://scripts.iucr.org/cgi-bin/paper?S0907444913021859 | Structure of the prolyl-acyl carrier protein oxidase involved in the biosynthesis of the cyanotoxin anatoxin-a | 2013 | K Moncoq, L Regad, S Mann, A Mejean and O Ploux - Acta Crystallographica Section D Biological Crystallography, 2013 - scripts.iucr.org | ... coordinates and structure factors have been deposited in the Protein Data Bank (PDB) as entry ...PDB code, Enzyme, Enzyme class, Source, Identity (%), Similarity (%), Rmsd (?), No. ... 3d6b, Glutaryl-CoA dehydrogenase (apoenzyme), GCD, Burkholderia pseudomallei, 27, 45, 1.88, ... |
| 10 | 3r0o | - | http://link.springer.com/article/10.1007/s00253-015-6551-z | Metabolism of β-valine via a CoA-dependent ammonia lyase pathway | 2015 | M Otzen, CG Crismaru, CP Postema, HJ Wijma… - Applied microbiology …, 2015 - Springer | ... to the Thermus thermophilus PaaG (35 % identity), a predicted 2, 3-dehydroadipyl-CoA hydrataseof which the structure is solved (PDB 3HRX ... searches of the protein encoded by ORF12 showedhomology to Mycobacterium avium carnitinyl-CoA hydratase (3R0O; 48 % identity ... |