We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 4H3Z | 2012 | 6 |
| 4GHK | 2012 | 6 |
| 4EO9 | 2012 | 6 |
| 3LA9 | 2010 | 6 |
| 4DQ8 | 2012 | 6 |
| 3KRE | 2009 | 6 |
| 7JV4 | 2021 | 6 |
| 3LLS | 2010 | 6 |
| 3TSC | 2011 | 6 |
| 3PXX | 2010 | 6 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5bnt | - | https://onlinelibrary.wiley.com/doi/abs/10.1107/S2053230X17017241 | Structure of aspartate semialdehyde dehydrogenase from Francisella tularensis | 2018 | NJ Mank, S Pote, KA Majorek- Section F: Structural, 2018 - Wiley Online Library | NADP+ (yellow spheres) is modeled using the structure of H. influenzae ASADH ( PDB PDB entry 3pzr; Pavlovsky et al., 2012), Pseudomonas aeruginosa ( PDB entry 5bnt ; Seattle Structural entry 1t4b; Nichols et al., 2004) and Haemophilus influenzae (HiASADH; PDB entry 1pqu |
| 2 | 2ko7 | - | http://search.ebscohost.com/login.aspx?direct=true&profile=ehost&scope=site&auth... | Structure-based Computational analysis of Protein Binding sites for Function and Druggability in Macrophage Infectivity Potentiator (MIP) Protein of Legionella pneumophila | 2013 | CK Naidu, Y Suneetha - Current Trends in Biotechnology & Pharmacy, 2013 - search.ebscohost.com | ... with rapamycin protein (mip) (PDB ID: 2VCD) (Ceymann et al., 2008) was retrieved from the proteindata bank (PDB). ... PDB ID Protein Name ... 2KO7 Chain A Solution structure of peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with Cycloheximide- N ... |
| 3 | 3ijp | - | http://ir.inflibnet.ac.in:8080/jspui/handle/10603/82176 | Cloning overexpression purification and characterization of DAPB gene encoding dihydrodipicolinate reductase of pseudomonas aeruginosa PAO1 | 2016 | V Anand - 2016 - ir.inflibnet.ac.in | ... preliminary crystallization reports have been published for Staphylococcus aureus (Dommarajuet al., 2010) and Bartonella henselae (PDB code 3IJP) as well. ... biosynthesis enzyme from P.aeruginosa PAOl is an essential step to finally determine its 3-D structure and can ... |
| 4 | 3oib | - | http://search.proquest.com/openview/eb228335c85968dacf18bd20cd94cc39/1?pq-origsi... | Identification and characterization of cholesterol metabolism related genes and gene products from Mycobacterium tuberculosis | 2015 | M Yang - 2015 - search.proquest.com | ... Cholesterol has indispensible structural and regulatory roles in humans. ... N-terminis. C-terminus.Figure 2-1. Typical human homotetrameric ACAD structure. (a) Homotetrameric assembly of.human MCAD (PDB code: 1EGC) with four FAD molecules (yellow spheres) and four. ... |
| 5 | 3ek2 | - | http://www.freepatentsonline.com/y2017/0088822.html | Crystalline Structure of FABI from Burkholderia Pseudomallei | 2017 | NR Krishnamurthy - US Patent , 2017 - freepatentsonline.com | ... Analysis of X-Ray Structure of BpmFabI. ... The structural superposition showed an rms deviationof 1.047 , 0.87 and 1.07 respectively for Bpm (256 Ca atoms; PDB; 3EK2), Ec (251 Caatoms; PDB; 4JQC) and ScFabI (242 Ca atoms; PDB; 4FS3) crystal structures. ... |
| 6 | 3khw | - | http://www.pjps.pk/wp-content/uploads/pdfs/27/3/SUP-41.pdf | 3D protein structure prediction of influenza A virus based on optimization genetic algorithm. | 2014 | J Gao, PX Jin, HX Xu - Pakistan journal of pharmaceutical sciences, 2014 - pjps.pk | ... acid residues Sixty groups of influenza A (H1N1) virus protein were selected from PDB database, 3HTO, 4F15, 3B7E, 3BEQ, 3HTP, 3HTQ, 3HTT, 4EDB, 4B7N, 4B7M, 3M5R, 3M8A, 3LKN, 3QQ4, 3QQ3, 3TI3, 3LZF, 3M6S, 3UBE, 3UBJ, 3UBN-A, 4D9J, 3GBN, 3KHW, 4EDA, 2ZKO ... |
| 7 | 4zju | - | http://scholarworks.csun.edu/handle/10211.3/200116 | Battling Antibiotic Resistance by Investigation of Acinetobacter baumannii Enoyl Acyl Carrier Protein Reductase | 2018 | C Wong - 2018 - scholarworks.csun.edu | The active site residues of abFabI in green ( PDB ID: 4ZJU , ecFabI in blue ( PDB ID: 5CFZ) and InhA in magenta ( PDB ID: 4TRM) overlay relatively Bacterial Species Year Representative PDB ID FabI homologs are similar in sequence, but the structure of their active sites may |
| 8 | 3i4e | 3eol, 3p0x, 3e5b, 3oq8 | https://ubir.buffalo.edu/xmlui/handle/10477/79369 | Mechanistic Insights into the Catalytic Mechanism and Inhibition of Mycobacterium Tuberculosis Isocitrate Lyase | 2019 | S Ray - 2019 - ubir.buffalo.edu | an attractive target for drug development. 1.4.3 Structure of ICL Aspergillus nidulans [ PDB ID: 1DQU],67 M. tuberculosis [ PDB ID: 1F61, 1F8I, 1F8M, 5DQL],68- 69 Escherichia coli [ PDB ID:1IGW]70, Burkholderia pseudomallei [ PDB ID: 3I4E (paper |
| 9 | 3uam | - | http://122.252.232.85:8080/jspui/bitstream/123456789/16590/1/131812%2C131520.pdf | Structural Dynamics of Lytic PolysaccHaride Monooxygenase | 2017 | P Bharval, S Sarswati, RM Yennamalli - 2017 - 122.252.232.85 | (a) For AA9 the reference structure is 2bem, (b)For AA10 the reference structure is 2bem (c) For AA11 the reference structure is 4MAH PDB ID RMSD 2BEN 0.303 2LHS 1.273 2XWX 0.491 2YOW 0.445 2YOX 0.474 2YOY 0.440 3UAM 0.700 4A02 0.880 4ALC 0.673 |
| 10 | 6bfu | - | https://link.springer.com/article/10.1186/s12859-019-3097-6 | Glycosylator: a Python framework for the rapid modeling of glycans | 2019 | T Lemmin, C Soto- BMC bioinformatics, 2019 - Springer | 1 ha0. 5fyl (gp120). 6bfu . Number of sequons. 6 A second N-Acetyl-D-Glucosamine will then be linked through a 1-4 glycosidic bond. Finally, an Alpha-D-Mannosewill be built ab initio and saved to a PDB file The structure of a mannose 9 will be imported as a Molecule instance |