We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5IFB | 2017 | 0 |
| 5IFC | 2017 | 0 |
| 5IFD | 2017 | 0 |
| 8SA9 | 2023 | 0 |
| 5IXU | 2016 | 0 |
| 5IZ4 | 2016 | 0 |
| 8SAA | 2023 | 0 |
| 8SAB | 2023 | 0 |
| 8SAC | 2023 | 0 |
| 5JSC | 2016 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3h81 | 3myb | http://aem.asm.org/content/early/2015/07/07/AEM.01686-15.short | Pseudomonas aeruginosa Isohexenyl Glutaconyl-CoA Hydratase (AtuE) Is Upregulated in Citronellate-grown Cells and Belongs to the Crotonase Family | 2015 | N Poudel, J Pfannstiel, O Simon, N Walter… - Applied and …, 2015 - Am Soc Microbiol | ... Initial phases were obtained with 223 molecular replacement using PHASER (21). Two searchmodels were constructed 224 (PDB accession code: 3H81, 37.0% seq. ... The stereochemistry 235of the structure was validated with MOLPROBITY (24) and various tools in COOT. ... |
| 2 | 4nbr | - | https://pubs.acs.org/doi/abs/10.1021/acs.jcim.0c01343 | PSIQUE: Protein Secondary Structure Identification on the Basis of Quaternions and Electronic Structure Calculations | 2021 | F Adasme-Carreno, J Caballero- Journal of Chemical, 2021 - ACS Publications | Inf. Model. 2021, 61, 4, 1789-1800. ADVERTISEMENT. RETURN TO ISSUEPREVComputational Chemis...Computational ChemistryNEXT. Journal Logo. PSIQUE: Protein Secondary Structure Identification on the Basis of Quaternions and Electronic Structure Calculations |
| 3 | 6nbo | - | https://www.sciencedirect.com/science/article/pii/S0269749120364927 | Purification, characterization, and catalytic mechanism of N-Isopropylammelide isopropylaminohydrolase (AtzC) involved in the degradation of s-triazine | 2021 | N Zhou, J Wang, W Wang, X Wu- Environmental Pollution, 2021 - Elsevier | The structural architecture of AtzC resembled that of cytosine deaminase in class III Purification and structural characterization of AtzE produced by the model bacterium Pseudomonas sp and substrate specificity of AtzC were studied, and the function, structure , and evolutionary |
| 4 | 3ue9 | - | http://scripts.iucr.org/cgi-bin/paper?S1744309113021921 | Purification, crystallization and preliminary X-ray analysis of adenylosuccinate synthetase from the fungal pathogen Cryptococcus neoformans | 2013 | RD Blundell, SJ Williams, CA Morrow? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2013 - scripts.iucr.org | ... Zhou, S. Peterson, W. Anderson & A. Joachimiak, unpublished work), Campylobacter jejuni (43% identity; PDB entry 3r7t ; Center for Structural Genomics of Infectious Diseases, unpublished work) and Burkholderia thailandensis (40% identity; PDB entry 3ue9 ; Seattle Structural ... |
| 5 | 3qxz | - | http://www.bdjn.org/APP_PDF/BDJN006-02-04.pdf | Purification, crystallization and X-ray crystallographic analysis of enoyl-CoA hydratase/isomerase-family protein from Cupriavidus necator H16 | 2018 | H Seo, KJ Kim- Biodesign, 2018 - bdjn.org | The structure of H16_B0756 was determined by molecular replacement with the CCP4 version of MOLREP (Vagin and Teplyakov 2009) using the structure of probable enoyl-CoA hydratase/isomerase from Mycobacterium abscessus ( PDB code 3QXZ ) as a search model |
| 6 | 3ndn | - | http://digitalcommons.unl.edu/chemistrydiss/21/ | Purification of Lysine Decarboxylase: A Model System for PLP Enzyme Inhibitor Development and Study | 2011 | LC Zohner - 2011 - digitalcommons.unl.edu | ... This is inferred from the crystal structure of a bond phosphono-analogue of L-alanine (pdb 1BD0). ... contrast to 2.6 ?, for the aspartate oxygen-pyridine nitrogen in the crystal structure of ornithine decarboxylase from Lactobacillus (pdb ID 1ORD), hinting that hydrogen ... |
| 7 | 3u03 | - | http://www.hindawi.com/journals/ipid/2012/843509/abs/ | Pyoverdine, the Major Siderophore in Pseudomonas aeruginosa, Evades NGAL Recognition | 2012 | ME Peek, A Bhatnagar, NA McCarty? - Interdisciplinary Perspectives on Infectious Diseases, 2012 - hindawi.com | ... Recently, Strong and coworkers crystallized NGAL bound to pyochelin (PDB 3U03, deposited at the RCSB protein data bank) and the crystal structure clearly shows that pyochelin docks inside the calyx of NGAL but without binding avidly. ... |
| 8 | 3ek2 | - | http://www.google.com/patents/US20160376235 | Pyridone FabI Inhibitors and Uses Thereof | 2016 | P Tonge - US Patent App. 15/130,365, 2016 - Google Patents | ... Selected residues of the saFabI-NADPH-PT173 structure (gray, subunit F) and the centralhydrogen ... Structural differences between diphenyl ether and pyridone ternary complexes. ... residueroot mean square deviation (RMSD) values between the triclosan-bound (PDB code 4ALI ... |
| 9 | 4lfy | - | https://www.sciencedirect.com/science/article/pii/S0141813019322287 | Pyrimidine biosynthesis in pathogensStructures and analysis of dihydroorotases from Yersinia pestis and Vibrio cholerae | 2019 | J Lipowska, CD Miks, K Kwon, L Shuvalova- International journal of, 2019 - Elsevier | As the first DHO structure ( PDB ID 1J79) was deposited in 2001, structural information was not available to guide the DHO classification proposed in 1999. In 2014, an updated phylogenetic tree based on structure -guided sequence alignments using structures available for nine .. Table 1 Burkholderia cenocepacia 4LFY 2013 Structural genomics (SSGCID) |
| 10 | 4hvt | - | https://chemrxiv.org/ndownloader/articles/7053812/versions/1/export_pdf | Pyrococcus furiosus Prolyl Oligopeptidase: A Dynamic Supramolecular Host for Peptidase and Dirhodium Catalysis | 2018 | K Ellis-Guardiola, H Rui, R Beckner, P Srivastava - 2018 - chemrxiv.org | both Pfu POP and the S447C mutant possess a two-domain architecture involving a peptidase domain reported homology model; M. xanthus chain A from 2BKL; R. typhi from 4HVT ; S. Scrofa from 1QFS; H. Page 17 S1). The structure of |