We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6O4N | 2019 | 0 |
| 6O3F | 2019 | 0 |
| 6NUP | 2019 | 0 |
| 6NRZ | 2019 | 0 |
| 6NHI | 2019 | 0 |
| 6NDR | 2018 | 0 |
| 6NBM | 2019 | 0 |
| 6NB2 | 2019 | 0 |
| 6NB0 | 2018 | 0 |
| 6N1M | 2018 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5vwm | - | https://pubs.acs.org/doi/abs/10.1021/acs.jmedchem.9b01604 | Discovery of Novel Inhibitors of LpxC Displaying Potent in Vitro Activity against Gram-Negative Bacteria | 2019 | JP Surivet, P Panchaud, JL Specklin- Journal of Medicinal, 2019 - ACS Publications | UDP-3-O-((R)-3-hydroxymyristoyl)-N-glucosamine deacetylase (LpxC) is as an attractive target for the discovery and development of novel antibacterial drugs to address the critical medical need crea... |
| 2 | 4tv4 | - | https://www.sciencedirect.com/science/article/pii/S0092867419302028 | Cryo-EM Structure and Assembly of an Extracellular Contractile Injection System | 2019 | F Jiang, N Li, X Wang, J Cheng, Y Huang, Y Yang- Cell, 2019 - Elsevier | Overall, the PVC particle displays a simplified structure of the bacterial phage A simplified architecture of T4 phage baseplate lies in the PVC syringe: Pvc5, Pvc7, Pvc8, and Pvc10 form a continuous central spike extending from the inner tube; Pvc11 (D) Initial models of Pvc1, Pvc2, Pvc9 and Pvc11 were built based onPDB: 4TV4, 3J9Q, 2IA7, 5HX2, respectively |
| 3 | 3i0p | - | https://link.springer.com/article/10.1007/s00239-018-9884-2 | Gene encoding a novel enzyme of LDH2/MDH2 family is lost in plant and animal genomes during transition to land | 2019 | LV Puzakova, MV Puzakov, AA Soldatov- Journal of molecular evolution, 2019 - Springer | Prediction of structure and properties of the discov- ered enzyme identified the highest homology to 3I0P pro- tein (P Although tertiary struc- ture of 3I0P protein (malate dehydrogenase from Entamoeba histolytica, https ://doi.org/10.2210/pdb3i 0p/ pdb ) and 1V9N |
| 4 | 6c5v | - | https://books.google.com/books?hl=en&lr=&id=32CqDwAAQBAJ&oi=fnd&pg=PA313&dq=%226... | Gammaherpesvirus entry and fusion: A tale how two human pathogenic viruses enter their host cells | 2019 | BS Mhl, J Chen, R Longnecker- Adv. Virus Res, 2019 - books.google.com | 323 Gammaherpesvirus entry and fusion (Waterhouse et al., 2018) based on the crystal structures of EBV gB ( PDB ID: 3FVC), gH ( 6C5V ) and gL The structural sequence alignment of EBV and KSHV gB based on the crystal structure of EBV gB (3FVC)(Backovic et al., 2009 |
| 5 | 4pfz | 3rr6, 3qdf | https://www.sciencedirect.com/science/article/pii/S0006291X18328705 | Structural and functional analysis of a dimeric fumarylacetoacetate hydrolase (EaFAH) from psychrophilic Exiguobacterium antarcticum | 2019 | W Yoo, CW Lee, B Kim, LTHL Le, SH Park- Biochemical and, 2019 - Elsevier | overall monomer structure , a schematic diagram of the connectivity, and the residue numbering of each secondary structure are shown in ID:3RR6, Z score: 34.6), a 5-carboxymethyl-2- hydroxymuconate delta-isomerase from Mycobacterium smegmatis ( PDB ID: 4PFZ ; Z score |
| 6 | 4qhq | - | https://scripts.iucr.org/cgi-bin/paper?tb5146 | Structural insights into the substrate specificity of SP_0149, the substrate-binding protein of a methionine ABC transporter from Streptococcus pneumoniae | 2019 | B Jha, R Vyas, J Bhushan, D Sehgal- Section F: Structural, 2019 - scripts.iucr.org | Z-score Rmsd (A ) Nalign %seq} Bound substrate PDB code Protein name and description 15.2 1.36 223 41 Met 4qhq A nutrient-binding protein (bound to methionine in the Sequence identity in SSM is calculated from structure (three-dimensional), rather than sequence |
| 7 | 3sbx | - | https://www.sciencedirect.com/science/article/pii/S1097276519302606 | (p) ppGpp Regulates a Bacterial Nucleosidase by an Allosteric Two-Domain Switch | 2019 | YE Zhang, RL Brentsen, T Fuhrer, U Sauer, K Gerdes- Molecular cell, 2019 - Elsevier | marinum showing similarity to the PpnN core domain and determined in the presence of adenosine monophosphate (AMP) ( PDB : 3SBX , Figure S3 Vibrio cholerae and Idomarina baltica, at a similar position to the phosphate of AMP in the M. marinum structure , suggesting that |
| 8 | 2mj3 | - | https://www.frontiersin.org/articles/10.3389/fenrg.2019.00079/abstract | Evolutionary relationships between low potential ferredoxin and flavodoxin electron carriers | 2019 | IJ Campbell, GN Bennett, JJ Silberg- Frontiers in Energy Research, 2019 - frontiersin.org | This bioinformatic study highlights understudied PECs whose structure , stability, and partner specificity should be 1CZP, 2WLB, 3LXF, 1B9R, 1UWM, 1PDX, 1M2D, 1I7H, 3AH7, 2MJD, 2MJ3 , 2Y5C, 5FFI For Flds, we used PDB IDs 2FZ5, 1FLD, 4HEQ, 2HNA, 2FX2, 3F6R, 3KAP |
| 9 | 4qtp | - | https://www.biorxiv.org/content/10.1101/674879v1.abstract | SiaABCDA threonine phosphorylation pathway that controls biofilm formation in Pseudomonas aeruginosa | 2019 | WH Poh, J Lin, B Colley, N Mller, BC Goh- BioRxiv, 2019 - biorxiv.org | 7NTU Institute of Structural Biology, Nanyang Technological University, Singapore 18 Biofilms are ubiquitous, multicellular structures embedded in a self-made matrix, that can suspended biofilms greatly influence the development, structure and function of their surface-attached |
| 10 | 5unb | - | https://ora.ox.ac.uk/objects/uuid:bd3dc30e-2835-45d8-b1ba-dafa2f552e98/download_... | Janus kinase inhibition for autoinflammation in DNASE2 deficiency | 2019 | S Nanthapisal, A Cavounidis, H Takeshita- Journal of Allergy and, 2019 - ora.ox.ac.uk | Structural modeling Structural models and figures were prepared by using the ICM software package (MolSoft, San Diego, Calif). A homology model for human DNase II was prepared by using the existing structure from B thailandensis ( PDB 5UNB ) as the model template |