We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5TE9 | 2016 | 0 |
| 5TF4 | 2016 | 0 |
| 5THK | 2016 | 0 |
| 5THX | 2016 | 0 |
| 5TP4 | 2017 | 0 |
| 8SBV | 2023 | 0 |
| 5TR9 | 2016 | 0 |
| 8SBX | 2023 | 0 |
| 5TT1 | 2016 | 0 |
| 5TVK | 2016 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5dvw | - | https://etd.ohiolink.edu/!etd.send_file?accession=kent1511199228856908&dispositi... | Evolutionary Trends in Viral Pathogens within and between Outbreaks | 2017 | ME Saha - 2017 - etd.ohiolink.edu | for VP35 the 3FKE and 4YPI maps were used. For the other VP proteins: maps 4LDD and 4LDB for VP40, maps 2I8B and 5DVW |
| 2 | 2khp | - | https://etd.ohiolink.edu/!etd.send_file?accession=akron1460988438&disposition=at... | Identifying selective ligands for glutaredoxin proteins with fragment based drug design approach and optimization of the bacterial selective hits | 2016 | RB Khattri - 2016 - etd.ohiolink.edu | ...These were compared to structures deposited in the Protein Data Bank (RCSB PDB). The PBD name for the BrmGRX is 2KHP (Leeper et. al, 2011) and hGRX1 is 1JHB (Sun et. al, 1998).. ... |
| 3 | 5cc8 | - | https://etd.auburn.edu/handle/10415/6361 | Transition from classical methods to new strategies: Mechanistic evaluation of inhibitors against Mycobacterium tuberculosis shikimate kinase | 2018 | N Ren Fuanta - 2018 - etd.auburn.edu | of each family. As stated previously, structural information and interactions with substrate(s) or Group Family and members Example Structure Group 1: Protein S/TY kinase/ atypical protein kinase/ lipid kinase/ ATP- grasp Thiamine-monophosphate kinase PDB : 5CC8 (50) |
| 4 | 6c9e | - | https://escholarship.org/uc/item/5rh0j6b2 | Molecular and shell biologyexamining the biochemistry and physiology of prokaryotic nanocompartments | 2020 | RJ Nichols - 2020 - escholarship.org | (B) Size comparison of the nanocompartments to GFP [ PDB : 1C4F], the HK97 viral capsid [ PDB : 1OHG], and the Lastly, given that there is no known structure of a DyP- packaging encapsulin, these nanocompartments may have a pore architecture that permits transit |
| 5 | 6mb1 | - | https://elifesciences.org/articles/57861 | Profiling of myristoylation in Toxoplasma gondii reveals an N-myristoylated protein important for host cell penetration | 2020 | M Broncel, C Dominicus, L Vigetti, SD Nofal, EJ Bartlett- Elife, 2020 - elifesciences.org | structure with bound IMP-1002 ( PDB : 6MB1 , [Schlott et al., 2019]) revealed high sequence identity (57%) and showed that all residues directly involved in compound binding are conserved within the TgNMT active site and therefore predicted to adopt an identical structural |
| 6 | 5j3b | - | https://edoc.ub.uni-muenchen.de/26990/ | The translation elongation factor P in actinobacteria | 2020 | B Pinheiro Damasceno Florentino - 2020 - edoc.ub.uni-muenchen.de | NC Nascent peptide-chain ORF Open reading frame PCR Polymerase chain reaction PDB Protein data EF- P facilitates translation of XPPX motifs is based in many structural studies... Structural superposition and ribbon representations of available EF-P structures. C. glutamicum (PDB code 6S8Z, orange, this work), Acinetobacter baumannii (PDB code: 5J3B, blue), E. coli ( |
| 7 | 3oa1 | - | https://edoc.ub.uni-muenchen.de/23348/1/Wachowius_Marco.pdf | The rabies virus phosphoprotein: novel targets and functions involved in interferon antagonism | 2016 | M Wachowius - 2016 - edoc.ub.uni-muenchen.de | After attachment to the extracellular target structure Structural data available for the dimerization domain ( PDB ID 3L32) and C- terminal domain ( PDB ID 3OA1 ) were visualized with Cn3D software by NCBI B) Overview over the RABV P trafficking signals |
| 8 | 3o0m | - | https://edoc.ub.uni-muenchen.de/21623/ | Evolutionary coupling methods in de novo protein structure prediction | 2016 | S Seemayer - 2016 - edoc.ub.uni-muenchen.de | On homomeric proteins, intermolecular couplings (red) have to be disentangled from intramolecular couplings (yellow) for de novo structure prediction to succeed (representative contacts mapped on PDB code 3O0M) |
| 9 | 4iuj | - | https://ecommons.udayton.edu/uhp_theses/264/ | Toward a PA-Inhibitor Complex Crystal System: Influenza Polymerase Acidic Protein Fusion Constructs and Protein Expression | 2020 | R Kramb - 2020 - ecommons.udayton.edu | Figure 5 b (right) apo-PA crystal packing. PA ( PDB ID: 4IUJ ) is rendered as a surface, and a loop interest, our approach is to create different protein fusions of PA that will alter the crystal packing structure of PA, which could allow the visualization of the apo protein through |
| 10 | 5i0p | - | https://ecommons.cornell.edu/handle/1813/70073 | STRUCTURE AND FUNCTION OF THE PALMITOYLTRANSFERASE DHHC20 AND THE ACYL COA HYDROLASE MBLAC2 | 2019 | MIP Malgapo - 2019 - ecommons.cornell.edu | crystals ..... 43 The overall structure of hDHHC20 and zfDHHC15 is similar to what was predicted for DHHC enzymes .... 44 Two zinc ions serve a structural function in the cysteine-rich domain of DHHC20 ..... 44 |