SSGCID
Seattle Structural Genomics Center for Infectious Disease

Cited Structures: list of articles citing SSGCID structures

We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.

This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.

Cited structures

Manually reviewed citations

# PDB Additional SSGCID structures cited Link Title Year Citation Highlighted abstract
1 4lgv - http://search.proquest.com/openview/b04b4d65a244a74db03c8611b0eaa999/1?pq-origsi... Multi-Scale Simulation of Electrostatic Channeling 2018 Y Liu - 2018 - search.proquest.com Figure 2-6 (a) Illustration of the proposed channeling complex using a poly(lysine) bridge as an electrostatic surface between hexokinase (HK; PDB 3VF6) and glucose-6-phosphate dehydrogenase (G6PDH; PDB 4LGV). (b) Experimental reaction scheme used to study electrostatic channeling of the charge intermediate (glucose-6-phosphate) across a cationic peptide bridge.
2 4f82 4f4a http://search.proquest.com/openview/afda5488243a36c7973c912298122359/1?pq-origsi... Investigating Imatinib-Resistant Mutations in Abl Kinase 2020 A Lyczek - 2020 - search.proquest.com 10 *(52& Illustration of important structural features of imatini<
3 3gwc - http://search.proquest.com/openview/aa0a9dc6c9a061aa0200e2456abf28ac/1?pq-origsi... Virtual Screening of Novel Potent Molecules Targeting enoyl-ACP reductase as Antitubercular Agents by Molecular Docking studies 2019 V Shivakumar, PM Ramsana, M Risfa- Journal of, 2019 - search.proquest.com Fig 2. Structure and portions nomenclature of linezolid V. Shivakumar et al /J. Pharm. Sci. & Res NO. PDB ID RESOLUTION ENZYMES YEAR 1 2AF6 2.01 Trymidylate synthase 2005 2 2X23 1.80 enoyl-ACP reductase 2010 3 3GWC 1.9 Trymidylate synthase 2009
4 3oxk 3o0m, 3lb5, 3p0t, 3r6f http://search.proquest.com/openview/a6bee6255f2ecb6acc21ab8e2dbd25bd/1?pq-origsi... Structural Biology for Drug Design: Applications in Two Systems 2016 KM Maize - 2016 - search.proquest.com ... Structurally, the purple HIT-like clade (4EGU, 3OXK) appears to be highly related to the known Hint proteins, whereas the remaining three HIT-like clades differ from the Hints by the addition of a long 12-15 residue C- terminal helix ... Sequence alignment alone fails to properly separate these two structural subclasses: those that draw the C-terminal helix from the same monomer (2EO4, 3LB5, 3P0T, 3O0M, 3NRD, 3OHE, 3I4S, and 3I24), and those that cross over to ...
5 4di1 3moy http://search.proquest.com/openview/9e1cbcf92f9d0d582217fdb88b682434/1?pq-origsi... Structural and bioinformatic analysis of ethylmalonyl-CoA decarboxylase 2015 RL Roberts - 2015 - search.proquest.com ... is the murine methylmalonyl-CoA decarboxylase trimer (PDB code: 1ef8), bottom right is thehuman AUH protein hexamer (PDB code: 1hzd). ... Having a 3D structure of EMCD could allowresearchers to probe the active site and intelligently design structural perturbations to ...
6 4h4g 3p0x, 3p4t, 3e5b, 3i4e, 3oib http://search.proquest.com/openview/9b52df086a0858392215929c4a0b2187/1?pq-origsi... Structure of the Vibrio cholerae fatty acid regulator FadR 2015 W Shi - 2015 - search.proquest.com ... 3D6X, 1ZHG, 3DOY, 3DOZ, 3DP0, 3DP1, 3DP2, 3DP3, 3CF8, 3CF9, 3ED0, 3B7J, 3D04, 3AZ9,3AZ8, 3AZA, 3AZB, 4H4G, 2OKH, 2OKI ... (52, 70) and DNA-bound (PDB 1H9T and 1HW2) (69,70) structures are almost identical whereas the ligand-bound structure shows the ...
7 5eo6 - http://search.proquest.com/openview/8ed519e66d770fcd1d89f1dbb2d646ac/1?pq-origsi... A Molecular, Structural, and Cellular Multiple-Level Study Aimed at Understanding the Unique Reaction Catalyzed by the Last Enzyme in the Heme-Biosynthesis 2018 AIC Luna - 2018 - search.proquest.com Overlay of the structures of a representative heme b-bound chlorite dismutase and solvent This research aimed to understand ChdC function at the molecular, structural , and cellular levels The coproheme-bound ChdC structure revealed a helical-loop that is flexible and moves
8 3grk 4j07, 3tzq, 4eit, 3s55 http://search.proquest.com/openview/866f26bea089278c732b5974a08038aa/1?pq-origsi... Crosslinked helix dimers as versatile scaffolds for mimicking topologically complex epitopes 2018 MG Wuo - 2018 - search.proquest.com 1 1.2 Surface architecture variation among PPIs affect ligandability ..... 3 aliphatic core but lacks any heptad repeat structure and knob/hole packing orientation. ( PDB Codes: 1LLM, 1TMX, 3V3E) .... 57
9 3o0m - http://search.proquest.com/openview/769ccf38b4f4380a7bc1930f51547727/1?pq-origsi... Characterization of Mycobacterial Flap Endonuclease FenA and RNA Helicase HelY 2018 MLL Uson - 2018 - search.proquest.com There, she focused on the detection of circulating tumor cells and structural characterization of EphA3, a 122 Figure 4.3 Manganese ions in the FenA active site ..... 126 Figure 4.4 Active site architecture and structure -guided mutagenesis
10 3dmo 3mc4, 3laa, 3gir, 3qk8, 3l3b, 3kre, 3oc7, 3ixc, 3kzx, 3eiz, 3o0h, 3mqw, 3md7, 3pzy, 3o0k, 3fq3, 3mxu, 3mdx, 3js5, 3gp3, 3qhx, 3o0m, 3js4, 3o38, 3mqd, 3qlj, 3qd5, 3nrr, 3ndo, 3qbp, 3ol3, 3r6f, 3p32, 3lv0, 3njd, 3mpz, 3lqw, 3gwa, 3quv, 3dms, 3kzu, 3p2y, 3nfw, 3lnc, 3eg4, 3gbz, 3k31, 3fs2, 3qh4, 3oc9, 3ipw, 3pgx, 3oa3, 3h81, 3h7f, 3enk, 3ld3, 3k9w, 3oj7, 3lr4, 3oj6, 3gwc, 3i3f, 3ek2, 3oks, 3ngj, 3pk0, 3n5o, 3moy, 3qxz, 3cxk, 3ngf, 3ndn, 3e7d, 3ii9, 3meb, 3oec, 3nwo, 3qat, 3pe8, 3k2c, 3fvb, 3lb5, 3r1i, 3p0t, 3krs, 3hgb, 3f0d, 3ecd, 3mx6, 3gvg, 3p4t, 3myb, 3kxq, 3krb http://search.proquest.com/openview/6d1f24bc5507d574e710805358571132/1?pq-origsi... Rare Sidechain Conformations in Proteins and DNA 2015 BJ Hintze - 2015 - search.proquest.com ... Ponder and Richards in 1987 (Ponder and Richards, 1987), and they are important. tools in structural biology (Dunbrack, 2002). ... the Protein Data Bank ( PDB ) (Berman, 2000). ... 2010; Winn et al., 2011), protein structure prediction and design (Bower et al., 1997; ...