We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5VN6 | 2017 | 0 |
| 8SLF | 2023 | 0 |
| 8SLD | 2023 | 0 |
| 9Z8K | 2025 | 0 |
| 8SKF | 2023 | 0 |
| 9Z9C | 2025 | 0 |
| 5VIX | 2017 | 0 |
| 5VC2 | 2017 | 0 |
| 5VA8 | 2017 | 0 |
| 5V77 | 2017 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3emj | 3ld3, 3lo0, 3gvf, 3fq3 | http://www.doria.fi/handle/10024/69593 | The Structural Basis for inorganic Pyrophosphatase Catalysis and Regulation | 2011 | H Tuominen - 2011 - doria.fi | ... In addition, the PPase structures from five other species (Anaplasma phagocytophilum, Ehrlichia chaffeensis, Burkholderia pseudomallei, Brucella melitensis and Rickettsia prowazekii) (PDB ID: 3LD3, 3LO0, 3GVF, 3FQ3 and 3EMJ, respectively) obtained in the latest structural ... |
| 2 | 3qi6 | - | http://onlinelibrary.wiley.com/doi/10.1002/cbic.201402489/full | Identification and Characterization of a Methionine γ‐Lyase in the Calicheamicin Biosynthetic Cluster of Micromonospora echinospora | 2015 | H Song, R Xu, Z Guo - ChemBioChem, 2015 - Wiley Online Library | ... with iMOSFILM, and scaled with SCALA (CCP4 suite).35 The initial search model was generatedby pruning non-conserved residues of the Mycobacterium ulcerans cystathionine γ-synthase(MetB; PDB ID: 3QI6) with CHAINSAW.36 The structure of CalE6 was ... |
| 3 | 5ha4 | - | https://onlinelibrary.wiley.com/doi/abs/10.1002/jmr.2894 | In silico prediction, molecular docking and binding studies of acetaminophen and dexamethasone to Enterococcus faecalis diaminopimelate epimerase | 2021 | H Singh, S Das, J Yadav, VK Srivastava- Journal of Molecular, 2021 - Wiley Online Library | are also available in the PDB , but are to date otherwise unpublished, including Acinetobacter baumannii ( PDB : 5HA4 ), Bacillus anthracis ( PDB : 2OTN structural and functional studies of DAP epimerase from different organisms have reported that the structure consists of |
| 4 | 3sbx | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4979012/ | Structural basis for cytokinin production by LOG from Corynebacterium glutamicum | 2016 | H Seo, S Kim, HY Sagong, HF Son, KS Jin - Scientific , 2016 - ncbi.nlm.nih.gov | ... also showed that LOGs from C. purpurea (CpLOG, PDB CODE 5AJT, Z-score 26.8) and M.marinum (MmLOG, PDB CODE 3SBX, Z-score ... To compare CgLOG with other LOGs, wesuperposed the CgLOG structure with other LOG proteins such as AtLOG3, CpLOG, and ... |
| 5 | 3sbx | 3qua | https://onlinelibrary.wiley.com/doi/abs/10.1111/1462-2920.14287 | Structural insight into molecular mechanism of cytokinin activating protein from Pseudomonas aeruginosa PAO1 | 2018 | H Seo, KJ Kim- Environmental microbiology, 2018 - Wiley Online Library | 29.9), Mycobacterium marinum (MmLOG, PDB code 3SBX , Z-score 28.7), Mycobacterium PDB code 5AJU, Z-score 27.2), with amino acid identities higher than 40%. In contrast, the structure of PA4923 shows relatively low homology to type-II LOGs, such as those from |
| 6 | 3qxz | - | https://link.springer.com/article/10.1007/s12257-018-0393-3 | Crystal Structure of a Novel Type Isomerase of Enoyl-CoA Hydratase/Isomerase Family Protein from Cupriavidus necator H16 | 2019 | H Seo, KJ Kim- Biotechnology and Bioprocess Engineering, 2019 - Springer | code 5Z7R, Z-score 31.5 and 1.7 rmsd) and probable enoyl- CoA hydratase/isomerase from Mycobacterium abscessus ( PDB code 3QXZ , Z-score has highly conserved enoyl-CoA hydratase fold but its functional implication cannot be obtained from the overall structure |
| 7 | 3qxz | - | http://www.bdjn.org/APP_PDF/BDJN006-02-04.pdf | Purification, crystallization and X-ray crystallographic analysis of enoyl-CoA hydratase/isomerase-family protein from Cupriavidus necator H16 | 2018 | H Seo, KJ Kim- Biodesign, 2018 - bdjn.org | The structure of H16_B0756 was determined by molecular replacement with the CCP4 version of MOLREP (Vagin and Teplyakov 2009) using the structure of probable enoyl-CoA hydratase/isomerase from Mycobacterium abscessus ( PDB code 3QXZ ) as a search model |
| 8 | 3sbx | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5379747/ | Structural basis for a novel type of cytokinin-activating protein | 2017 | H Seo, KJ Kim - Scientific Reports, 2017 - ncbi.nlm.nih.gov | ... M. marinum (MmLOG) in complex with AMP (Protein Data Bank code 3SBX) revealed the ... Therefined model of CgLOGII was deposited in the Protein Data Bank (PDB code 5WQ3 ... Thethree-dimensional structure of Lonely Guy from Claviceps purpurea provides insights into the ... |
| 9 | 3l56 | - | http://www.sciencedirect.com/science/article/pii/S0042682217301861 | Evolutionary conservation of influenza A PB2 sequences reveals potential target sites for small molecule inhibitors | 2017 | H Patel, A Kukol - Virology, 2017 - Elsevier | ... 2.2. Protein structure modelling. The PB2 sequence of a human H5N1 isolate, for which an N-terminal structural fragment ( PDB ID: 3L56 ) exists, was used to construct a full length structural model using the I-TASSER modelling server (Yang and Zhang, 2015; Zhang, 2008). ... |
| 10 | 3l56 | - | http://uhra.herts.ac.uk/handle/2299/19623 | Evolutionary targeted discovery of influenza A virus replication inhibitors | 2018 | H Patel - 2018 - uhra.herts.ac.uk | 4.4.2 Structure and predicted binding site locations of the NEP NCI National cancer institute NEP Nuclear export protein NLS Nuclear localisation signal NS1 Non- structural protein 1 basic protein 1 PB2 Polymerase basic protein 2 PBS Phosphate buffer saline PDB Protein data |