We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 8SQO | 2023 | 0 |
| 8SQP | 2023 | 0 |
| 6ANZ | 2017 | 0 |
| 6AP5 | 2017 | 0 |
| 6AQ3 | 2017 | 0 |
| 8SQQ | 2023 | 0 |
| 6AQH | 2017 | 0 |
| 6AQY | 2017 | 0 |
| 8SQR | 2023 | 0 |
| 8SQT | 2023 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 7jzl | 7jzn | https://pubs.acs.org/doi/abs/10.1021/acs.jcim.1c00766 | Allosteric Control of Structural Mimicry and Mutational Escape in the SARS-CoV-2 Spike Protein Complexes with the ACE2 Decoys and Miniprotein Inhibitors: A | 2021 | GM Verkhivker, S Agajanian, DY Oztas- Journal of Chemical, 2021 - ACS Publications | Allosteric Control of Structural Mimicry and Mutational Escape in the SARS-CoV-2 Spike Protein Complexes with the ACE2 Decoys and Miniprotein Inhibitors: A Network-Based Approach for Mutational Profiling of Binding and Signaling |
| 2 | 7k43 | 7k4n | https://pubs.acs.org/doi/abs/10.1021/acs.jpcb.1c00395 | Integrated Biophysical Modeling of the SARS-CoV-2 Spike Protein Binding and Allosteric Interactions with Antibodies | 2021 | GM Verkhivker, L Di Paola- The Journal of Physical Chemistry B, 2021 - ACS Publications | Structural and biochemical studies of the severe acute respiratory syndrome (SARS)-CoV-2 spike glycoproteins and complexes with highly potent antibodies have revealed multiple conformation-dependen... |
| 3 | 3qhd | 3k14, 3q8h | http://search.proquest.com/openview/bed8a205da9b955be3ea1b46f7b199e9/1?pq-origsi... | Design and synthesis of IspD, IspE and IspF enzyme inhibitors of the methylerythritol phosphate pathway | 2016 | GM Goshu - 2016 - search.proquest.com | a fragment hit co-crystallized with Burkholderia pseudomallei (Bp) IspF ( PDB code: 3QHD ).2 Meroterpenoids contain non-isoprenoid structure Thiamine diphosphate (TDP) and Mg2+ bound to active site of E. coli DXS ( PDB code: 2O1S).68 Color: (magnesium) magenta |
| 4 | 4dz6 | - | http://www.springerlink.com/index/U317127747468386.pdf | Reflections on biocatalysis involving phosphorus | 2012 | GM Blackburn, MW Bowler, Y Jin, JP Waltho - Biochemistry (Moscow), 2012 - Springer | ... Moreo v er , kindred results can be deriv ed fro m metav ana - date co mplexes, as for the recent structure of a nucleoside diphosphate kinase with ADP linked through v anadate to His134. This show s O–P–N distance of 4.48 Å and an angle of 172.11° (PDB: 4DZ6) ... |
| 5 | 4dz6 | - | https://www.degruyter.com/view/j/pac.2017.89.issue-5/pac-2016-0202/pac-2016-0202... | How to name atoms in phosphates, polyphosphates, their derivatives and mimics, and transition state analogues for enzyme-catalysed phosphoryl transfer reactions | 2017 | GM Blackburn, J Cherfils, GP Moss- Pure and Applied, 2017 - degruyter.com | Check Out. Menu: Subjects: Architecture and Design; Arts; Asian and Pacific Studies; Business and Economics; Chemistry; Graphical representation standards for chemical structure diagrams (IUPAC Recommendations 2008) by Brecher, Jonathan; Measurement of cellulase |
| 6 | 4dz6 | - | https://www.degruyter.com/view/journals/pac/89/5/article-p653.xml | How to name atoms in phosphates, polyphosphates, their derivatives and mimics, and transition state analogues for enzyme-catalysed phosphoryl transfer | 2017 | GM Blackburn, J Cherfils, GP Moss- Pure and Applied, 2017 - degruyter.com | Architecture and Design Arts Asian and Pacific Studies Business and Economics Chemistry Classical and Ancient Near Eastern Studies Computer Sciences Cultural Studies Engineering General Interest Geosciences History Industrial Chemistry Islamic and Middle Eastern |
| 7 | 4dz6 | - | https://www.degruyter.com/view/j/pac.2017.89.issue-5/pac-2016-0202/pac-2016-0202... | How to name atoms in phosphates, polyphosphates, their derivatives and mimics, and transition state analogues for enzyme-catalysed phosphoryl transfer reactions ( | 2017 | GM Blackburn, J Cherfils, GP Moss - Pure and Applied , 2017 - degruyter.com | ... For the nucleoside-diphosphate kinase from B. burgdorferi, a vanadate transition state complex links ADP and His 134 as axial ligands (PDB entry 4DZ6). There is no catalytic metal to coordinate the three equatorial oxygen atoms. ... |
| 8 | 3v7o | - | https://books.google.com/books?hl=en&lr=&id=_E0zDwAAQBAJ&oi=fnd&pg=PR6&dq=%223V7... | Viral Shapeshifters: Strange Behaviors of HIV and Other Viruses | 2017 | GKM Goh - 2017 - books.google.com | and www.ncbi.nlm.nih.gov. Jmol and CN3D were used in this book. Sequences and structural protein databank ( PDB ) files are available at www.ncbi.nlm.nih.gov Linus Pauling discov- ered a common helical structure , the alpha helix, among pro- teins |
| 9 | 4f4f | 3v7n | http://www.tandfonline.com/doi/abs/10.1080/15384101.2017.1363937 | Evolutionary analysis of a novel zinc ribbon in the N-terminal region of threonine synthase | 2017 | G Kaur, S Subramanian- Cell Cycle, 2017 - Taylor & Francis | ... Modeling of the spatial structure of eukaryotic ornithine decarboxylases. ... and H-group in SCOP (SCOP identifier 53685) 9 Murzin AG, Brenner SE, Hubbard T, Chothia C. SCOP: a structural classification of proteins database for the investigation of sequences and structures . ...Table 1 PDB ID 4F4F A/B |
| 10 | 3cez | 3cxk | https://www.liebertpub.com/doi/abs/10.1089/ars.2020.8037 | Structure and Electron-transfer Pathway of the Human Methionine Sulfoxide Reductase MsrB3 | 2020 | G Javitt, Z Cao, E Resnick, R Gabizon- and Redox Signaling, 2020 - liebertpub.com | MsrB3 molecules per asymmetric unit. The structure was solved by molecular replacement using a bacterial MsrB protein ( PDB code 3CEZ ) with high sequence identity to human MsrB3 (74 of 119 residues, or 62%) (6). Though the amino-terminal segment containing |