We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6C0D | 2018 | 0 |
| 6C0E | 2018 | 0 |
| 8T7W | 2023 | 0 |
| 8T7Z | 2023 | 0 |
| 3TZU | 2011 | 0 |
| 6C7C | 2018 | 0 |
| 6CAZ | 2018 | 0 |
| 6CJB | 2018 | 0 |
| 6CK0 | 2018 | 0 |
| 6CK7 | 2018 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3q8n | - | https://d-nb.info/1080209204/34 | Biocatalytic Synthesis of Amino Alcohols | 2015 | H Kohls - 2015 - d-nb.info | ATA Amine transaminase PDB Protein data bank Nevertheless, the structural scope of amines accessible with high yields and high optical pu- rities by these methods is Ver- nakalant, a 1,2-amino alcohol used as antiarrhythmic drug (see Figure 1 for the structure of Vernakalant |
| 2 | 3dah | - | http://link.springer.com/article/10.1007/s00792-014-0726-x | Structure of dimeric, recombinant Sulfolobus solfataricus phosphoribosyl diphosphate synthase: a bent dimer defining the adenine specificity of the substrate ATP | 2015 | RW Andersen, LL Leggio, B Hove-Jensen, A Kadziola - Extremophiles, 2015 - Springer | ... 1 3 structure of PRPP synthase of the thermophilic, metha- nogenic archaeon M. jannaschii istetrameric and appears to be built by two dimers ... 2007), and the Gram-negative Betaproteobacterium Burkholderia (Pseudomonas) pseudomallei (PDB code 3DAH) have hex ... |
| 3 | 3gtd | 3tv2, 3rd8, 3rrp, 3qbp, 3ome, 3oc7, 3njb, 3njd, 3myb, 3moy, 3he2, 3h81, 4qfe | http://www.sciencedirect.com/science/article/pii/S0734975015000208 | Stereochemistry of enzymatic water addition to C= C bonds | 2015 | BS Chen, LG Otten, U Hanefeld - Biotechnology Advances, 2015 - Elsevier | ... Entry, Name (EC-number), Sources (PDB-number), Types of reaction, Cofactor, Regio- andstereoselectivity. ... sapiens (3E04) Mycobacterium abscessus (3RRP) Sinorhizobium meliloti (4HGV)Thermus thermophilus (1VDK) Rickettsia prowazekii (3GTD) Mycobacterium tuberculosis ... |
| 4 | 4k9d | - | http://www.sciencedirect.com/science/article/pii/S0001706X15000194 | Surface-displayed glyceraldehyde 3-phosphate dehydrogenase and galectin from Dirofilaria immitis enhance the activation of the fibrinolytic system of the host | 2015 | J González-Miguel, R Morchón, M Siles-Lucas… - Acta tropica, 2015 - Elsevier | ... msa/clustalw2/) and prediction of the secondary structures and three-dimensional modeling with the Swiss-Model server ( Arnold et al., 2006; http://swissmodel.expasy.org/) using as templates the X-ray crystal structure of a GAPDH from B. malayi (code pdb: 4K9D) for DiGAPDH ... |
| 5 | 4egf | - | http://pubs.acs.org/doi/abs/10.1021/jacs.5b08968 | A General Strategy for the Discovery of Metabolic Pathways: d-Threitol, l-Threitol, and Erythritol Utilization in Mycobacterium smegmatis | 2015 | H Huang, MS Carter, MW Vetting - Journal of the , 2015 - ACS Publications | ... 5) and (2) an experimentally verified l-xylulose reductase from M. smegmatis (MSMEG_3262;UniProt ID A0QXD6; PDB 4EGF) that shares 44 ... reaction that interconverts d-glyceraldhyde-3Pand dihydroxyacetone phosphate in glycolysis, ie, the active site structure can be ... |
| 6 | 3h81 | 3myb | http://aem.asm.org/content/81/19/6558.short | The Pseudomonas aeruginosa Isohexenyl Glutaconyl Coenzyme A Hydratase (AtuE) Is Upregulated in Citronellate-Grown Cells and Belongs to the Crotonase Family | 2015 | N Poudel, J Pfannstiel, O Simon, N Walter - Applied and , 2015 - Am Soc Microbiol | ... models were constructed (one with the structure with PDB accession number 3H81 [sequenceidentity, 37.0%] and one with the structure with PDB accession number ... The stereochemistry ofthe structure was validated with the MOLPROBITY program (24) and various ... |
| 7 | 3k2h | - | http://www.theses.fr/2015STRAF059 | Characterization of natural product biological imprints for computer-aided drug design applications | 2015 | N Sturm - 2015 - theses.fr | ... Changes in sequence and structure also explain the poor similarity between SB4 inhibitor-binding sites in Mitogen-activated protein (MAP) kinase 14 and MAP kinase 1 (PDB codes: 1bl7, 3erk), and between the antifolate LYA-binding site in human and protozoan thymidylate synthases (PDB codes: 1juj, 3k2h). ... |
| 8 | 3hhe | 3uw1 | http://www.sciencedirect.com/science/article/pii/S109332631400179X | Structural modeling and docking studies of ribose 5-phosphate isomerase from Leishmania major and Homo sapiens: A comparative analysis for Leishmaniasis … | 2015 | PVSZ Capriles, LPR Baptista, IA Guedes… - Journal of Molecular …, 2015 - Elsevier | ... identity: 42%); (iii) 2F8M [29], the R5PI type A structure from Plasmodium falciparum (identity:35%) and (iv) 3HHE [30], the R5PI type A structure from Bartonella ... The alignment analyses showedthat no PDB sequence was able to align against the 20 C-terminal amino acids ... |
| 9 | 4iv5 | - | http://www.mdpi.com/1422-0067/16/8/18836/pdf | From Genome to Structure and Back Again: A Family Portrait of the Transcarbamylases | 2015 | D Shi, NM Allewell, M Tuchman - International Journal of Molecular …, 2015 - mdpi.com | ... dodecameric holoenzyme with DHOase, were determined [50,51]. Only one eukaryotic ATCasestructure, of Trypanosoma cruzi, has been determined (PDB code: 4IV5). ... Both domains havean αβα structure with a parallel β-sheet in the center and α helices on both sides. ... |
| 10 | 3gp5 | 4dz6, 3gw8 | http://www.sciencedirect.com/science/article/pii/S0010854515001125 | Vanadium and proteins: Uptake, transport, structure, activity and function | 2015 | JC Pessoa, E Garribba, MFA Santos… - Coordination Chemistry …, 2015 - Elsevier | ...A more recent 2.2 Å structure of a transition state nucleoside diphosphate kinase from Borrelia burgdorferi bound to vanadate(V) and ADP was deposited (PDB: 4DZ6) ... Later the structure of the bacterial dPGM from Burkholderia pseudomallia was also solved complexed with vanadate(V) (PDB: 3GW8 and 3GP5) [319]; in the 3GW8 structure at 1.9 Å resolution, glycerol, from the crystallization conditions, reacted with vanadate(V) forming a species quite similar to the enzymatic substrate. ... |