We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 3PE8 | 2010 | 1 |
| 3P96 | 2010 | 20 |
| 3P85 | 2010 | 1 |
| 3P5M | 2010 | 1 |
| 3P4T | 2010 | 2 |
| 3P4I | 2010 | 6 |
| 3P2Y | 2010 | 0 |
| 3P0X | 2010 | 15 |
| 3P0T | 2010 | 4 |
| 3OXK | 2010 | 6 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3ndn | - | http://pubs.acs.org/doi/abs/10.1021/bi201090n | Characterization of the Side-Chain Hydroxyl Moieties of Residues Y56, Y111, Y238, Y338, and S339 as Determinants of Specificity in E. coli Cystathionine beta-Lyase | 2011 | PH Lodha, SM Aitken - Biochemistry, 2011 - ACS Publications | ... figure Scheme 2. Observed Contacts of the PLP-AVG External Aldimine Active Site of eCBL a. a The dotted lines represent putative hydrogen bond distances of ?3.3 ? between heteroatoms. The image was constructed using ChemDraw and PDB entry 1CL2.(3). ... |
| 2 | 3ndn | - | http://mic.sgmjournals.org/content/160/Pt_8/1571.short | Bacterial methionine biosynthesis | 2014 | MP Ferla, WM Patrick - Microbiology, 2014 - Soc General Microbiol | ... 2). Its presence in P. aeruginosa and P. putida has been discussed (Foglino et al., 1995; Alaminos & Ramos, 2001), and an unpublished structure of a Mycobacterium tuberculosis O-succinylhomoserine thiolase has been deposited in the Protein Data Bank (PDB ID 3NDN). ... |
| 3 | 3ndn | - | http://digitalcommons.unl.edu/chemistrydiss/21/ | Purification of Lysine Decarboxylase: A Model System for PLP Enzyme Inhibitor Development and Study | 2011 | LC Zohner - 2011 - digitalcommons.unl.edu | ... This is inferred from the crystal structure of a bond phosphono-analogue of L-alanine (pdb 1BD0). ... contrast to 2.6 ?, for the aspartate oxygen-pyridine nitrogen in the crystal structure of ornithine decarboxylase from Lactobacillus (pdb ID 1ORD), hinting that hydrogen ... |
| 4 | 3n5o | - | http://proteinsf.jbc.org/highwire/filestream/2190/field_highwire_a_download_vars... | The Impact of Nitric Oxide Toxicity on the | 2013 | G Ricci, MWP Federici, PG Board, D Bovi, ML Bello… - 2013 - ASBMB | ... The structural and electrostatic properties of Cys-based GSTs and Ser-based GSTs provide theexplanation for their lower affinity for DNDGIC. ... The comparison between the only availablecrystallographic structure of a DNGIC-GST complex (human GSTP1-1, PDB id: 1ZGN ... |
| 5 | 3n58 | - | https://www.nature.com/articles/s41598-018-29535-y | Metal-cation regulation of enzyme dynamics is a key factor influencing the activity of S-adenosyl-l-homocysteine hydrolase from Pseudomonas aeruginosa | 2018 | J Czyrko, J Sliwiak, B Imiolczyk, Z Gdaniec- Scientific reports, 2018 - nature.com | Results. Overall structure of PaSAHase. We present four crystal structures of PaSAHase/ligand/ion(s) complexes at resolutions of 1.35 to 1.75 (Supplementary Information Table S1). Two complexes of Zn 2+ -containing PaSAHase |
| 6 | 3mx6 | - | http://search.proquest.com/openview/61c4474dc9c0d8c2eab66e35f99716fb/1?pq-origsi... | Methionine aminopeptidase as a target for the discovery of novel antibacterial agents | 2016 | C Chen - 2016 - search.proquest.com | ... 14. Figure 2-1. Crystal structure of RpMetAP I (PDB ID: 3MX6, Edwards T. et. al., 2010). Metalions shown in the active site as spheres are two Mn (II) ions. 15. Materials and Methods.Screening of suitable induction conditions for expression of RpMetAp I. ... |
| 7 | 3mx6 | - | https://www.mdpi.com/2218-273X/10/4/659 | P1 Residue-Oriented Virtual Screening for Potent and Selective Phosphinic (Dehydro) Dipeptide Inhibitors of Metallo-Aminopeptidases | 2020 | M Talma, A Mucha- Biomolecules, 2020 - mdpi.com | 20 to keep the size similar to the grid from the first step (36 for PDB : 2EK8 In general, the structure proposed here surpasses known inhibitors As the overall architecture of the S1 binding sites of porcine, bacterial, and protozoal APNs is rather conserved, the advantageous ... Table 1. Cont. Rickettsia prowazekii 3MX6 [41] |
| 8 | 3mx6 | - | https://www.sciencedirect.com/science/article/pii/S0141813019301175 | Discovery of a new class of type 1 methionine aminopeptidases that have relaxed substrate specificity | 2019 | SC Bala, N Haque, V Pillalamarri, R Reddi- International journal of, 2019 - Elsevier | 3MX6 , R. prowazekii, 99% (C), 1% (L) Based on this analysis, MetAP1n has different active site architecture and hence has a substrate preference for leucine in addition 3c. Column 2 describes the result analysis of the HSSP file associated with EcMetAP1a structure ( PDB : 1C21 |
| 9 | 3mqw | 3m1x | https://link.springer.com/article/10.1007/s00436-018-6065-6 | Identification of a perchloric acid-soluble protein (PSP)-like ribonuclease from Trichomonas vaginalis | 2018 | A Villalobos-Osnaya, G Garza-Ramos, IN Serratos- Parasitology, 2018 - Springer | The trimeric model was built using a crystal- lographic ribonuclease structure ( PDB ID: 3R0P) as a tem resolution less than 2 (1QU9, 3M1X, 2UYK, 2UYN, 2CVL, 1JD1, 1QD9, 3QUW, 3MQW , 3VCZ, 1ONI 4e). To gain insight the secondary structure properties of rTv-PSP1, itsfar |
| 10 | 3mqd | - | https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/vx02... | Exploring Protein Structure: Seeing the Forest and the Trees | 2017 | AE Brereton - 2017 - ir.library.oregonstate.edu | Experimental Methods to Obtain Structures Only a few experimental methods exist that can yield enough information to accurately determine the 3-dimensional structure of a folded protein complete structural information often comes from using a combination of the methods |