We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 4JV3 | 2013 | 2 |
| 4JXJ | 2013 | 1 |
| 4MSO | 2013 | 1 |
| 4J3G | 2013 | 2 |
| 4KYX | 2013 | 8 |
| 4IZ9 | 2013 | 1 |
| 4JWP | 2013 | 2 |
| 4JPD | 2013 | 4 |
| 4MAQ | 2013 | 4 |
| 4MPQ | 2013 | 3 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3o0m | - | http://jb.asm.org/content/199/17/e00304-17.short | The DNA Repair Repertoire of Mycobacterium smegmatis FenA Includes the Incision of DNA 5 Flaps and the Removal of 5 Adenylylated Products of Aborted Nick | 2017 | ML Uson, S Ghosh, S Shuman - Journal of bacteriology, 2017 - Am Soc Microbiol | ... IMPORTANCE Structure -specific DNA endonucleases are implicated in bacterial DNA replication, repair, and recombination, yet there is scant knowledge ... We discuss the properties of mycobacterial FenA in light of insightful structural studies of eukaryal flap endonucleases (11 ... MSMEG_5028 (Rv1262c) has been characterized structurally (PDB entry 3O0M), but its biochemical activity is uncharted. |
| 2 | 4kam | - | https://depositonce.tu-berlin.de/handle/11303/6740 | Metabolic engineering of O-acetyl-L-homoserine sulfhydrylase and Met-biosynthetic pathway in Escherichia coli | 2017 | Y Ma - 2017 - depositonce.tu-berlin.de | ... secondary structure and overall stability of investigated proteins. All these reasons highlight ... Figure 2 |
| 3 | 4fkx | - | http://www.biomedcentral.com/1471-2105/15/184 | Insights into mechanism kinematics for protein motion simulation | 2014 | M Diez, V Petuya, LA Martnez-Cruz - BMC , 2014 - biomedcentral.com | ... obtained results have been compared with each proteins' structural data, available on the ProteinData Bank (PDB). The results are shown on Table 2. ... mass (Da) in secondary structures secondary structures (PDB) -helix -sheet -helix -sheet ... 4fkx 55.13 34.8 19.7 42 16 ... |
| 4 | 3eoo | - | http://www.tandfonline.com/doi/abs/10.1080/07391102.2016.1223754 | Design, Synthesis and Evaluation of Pyrazolo-Pyrazole Derivatives onMethylisocitratelyase Of Pseudomonas aeruginosa: Insilico and invitro study | 2016 | M Pulaganti, C Suresh Kumar - Journal of Biomolecular Structure , 2016 - Taylor & Francis | ... possessing the highest sequence identity. We finally picked the A-chain of 1MUM and 3EOOas ... carefully editing PIR file and PDB file template.The developed .ali, .py, pdb template files ...structure of MICL with build command of modeller, using default parameters. ... |
| 5 | 3ek2 | - | https://opus.uni-wuerzburg.de/opus4-wuerzburg/files/7086/Thesis_MariaHirschbeck_... | Structure-based drug design on the enoyl-ACP reductases of Yersinia pestis and Burkholderia pseudomallei | 2012 | MW Hirschbeck - opus.uni-wuerzburg.de | ... In the PDB database an apo structure of BpFabI had already been deposited (PDB code 3EK2), which was crystallized in 10% PEG 6000 and 100 mM HEPES pH 7.0. ... |
| 6 | 3p4t | - | http://search.proquest.com/openview/daf8fc817648cf5585c39f0c60983d2f/1?pq-origsi... | Mycobacterium tuberculosis cholesterol catabolism utilizes a structurally and evolutionarily discrete class of acyl-Coenzyme A dehydrogenase | 2015 | MF Wipperman - 2015 - search.proquest.com | This image (grey) shows the crystal structure of tetrameric FadE13 from M smegmatis (pdb: 3P4T) using the DAMAVER modeling algorithm. |
| 7 | 5t8t | - | https://papers.ssrn.com/sol3/papers.cfm?abstract_id=4651464 | Characterization of a Plant S-Adenosylmethionine Synthetase from Acacia Koa | 2023 | D Borthakur, JT Carrillo- Available at SSRN 4651464 - papers.ssrn.com | structural 8 changes due to mutagenesis (Fig. 8). Species name and PDB numbers of the 9 structures Neisseria gonorrhoeae ( 5T8T ), Lactiplantibacillus plantarum (7R3B). From eukarya |
| 8 | 3mmt | - | http://www.sciencedirect.com/science/article/pii/S2352340916304905 | Interaction network and mass spectrometry data of Xanthomonas citri subsp. citri surface proteins from differential proteomic analysis of infectious and non- | 2016 | CM Carnielli, J Artier, JCF de Oliveira - Data in Brief, 2016 - Elsevier | ... ID, Gene symbol, ENSEMBL, SWISS-PROT, Protein structure (PDB), Conserved domain (CDD),Gene ontology (GO). ... GO:0003735 structural constituent of ribosome, ... citri (strain 306) GN=XAC3344PE=3 SV=1, 3mmt Fructose-bisphosphate aldolase, cd00948, FBP_aldolase_I_a ... |
| 9 | 5v6d | - | https://papers.ssrn.com/sol3/papers.cfm?abstract_id=3188389 | A Centipede Toxin Family Defines a New Ancient Class of CS Defensins | 2018 | TS Dash, T Shafee, PJ Harvey, C Zhang- Available at SSRN, 2018 - papers.ssrn.com | structure of Sm2 against all structures of proteins contained within the Protein Data Bank ( PDB ) that are composed of more than 30 amino acids Thus, the minimal cysteine motif is by itself sufficient to generate a stable CS structure . Although the 2ds-CS architecture has |
| 10 | 4ed9 | - | http://broncoscholar.library.cpp.edu/handle/10211.3/215321 | Overexpression and Purification of the Protein BaiK for Structural Characterization by X-Ray Crystallography | 2020 | S Khuu - 2020 - broncoscholar.library.cpp.edu | Initially , BaiK was overexpressed to produce large quantity of protein for use in structural and structure being very similar to histidine while also being added at a high concentration. 11 formation of more ordered crystal structures . The effective concentration of the protein |