SSGCID
Seattle Structural Genomics Center for Infectious Disease

Cited Structures: list of articles citing SSGCID structures

We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.

This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.

Cited structures

Manually reviewed citations

# PDB Additional SSGCID structures cited Link Title Year Citation Highlighted abstract
1 3r4t - http://search.proquest.com/openview/efe1b9c57e1812b2a0458378ec81b092/1?pq-origsi... Modeling and Docking Study of GABA-AT Protein in Mycobacterium Tuberculosis-A Computational Approach 2018 R Sriroopreddy, P Raghuraman- Research Journal of, 2018 - search.proquest.com The best similarity match with the template identity of 83% ( PDB ID: 3R4T ) The secondary structure prediction was done using YASPIN server (http://zeus.few.vu.nl/).8 The result of the secondary structure prediction provides a brief idea about the folding pattern of the
2 3njd 3svk http://search.proquest.com/openview/ee126ccbca4d4d8958dd7f9217f8fdd2/1?pq-origsi... Protein 3-D Structure Representation for Alignment-Free Comparison and Structural Motif Discovery of Proteins, and Hierarchical Protein Classification 2015 S Singh - 2015 - search.proquest.com ... a lot more diversity and complexity, rather than having a simple, unique rigid structure, and that ...of a growing number of methods, there is no widely accepted 3-D structural alignment method.None of the current methods for searching PDB are guaranteed to find true matches in ...
3 3oib - http://search.proquest.com/openview/eb228335c85968dacf18bd20cd94cc39/1?pq-origsi... Identification and characterization of cholesterol metabolism related genes and gene products from Mycobacterium tuberculosis 2015 M Yang - 2015 - search.proquest.com ... Cholesterol has indispensible structural and regulatory roles in humans. ... N-terminis. C-terminus.Figure 2-1. Typical human homotetrameric ACAD structure. (a) Homotetrameric assembly of.human MCAD (PDB code: 1EGC) with four FAD molecules (yellow spheres) and four. ...
4 4iuj 4p9a http://search.proquest.com/openview/e042d9cdc035342db038fc10db68a8fe/1?pq-origsi... Computer-Aided Drug Discovery and Protein-Ligand Docking 2015 H Li - 2015 - search.proquest.com ... In addition to PAC-PB1N structures, two apo crystal structures of PAC in the absence of PB1 have been reported recently [322]. The first is a 1.9Å resolution structure of H1N1 PAC (PDB ID: 4IUJ). The second is a 2.2Å resolution structure of H7N9 PAC (PDB ID: 4P9A)...
5 3p4t - http://search.proquest.com/openview/daf8fc817648cf5585c39f0c60983d2f/1?pq-origsi... Mycobacterium tuberculosis cholesterol catabolism utilizes a structurally and evolutionarily discrete class of acyl-Coenzyme A dehydrogenase 2015 MF Wipperman - 2015 - search.proquest.com This image (grey) shows the crystal structure of tetrameric FadE13 from M smegmatis (pdb: 3P4T) using the DAMAVER modeling algorithm.
6 3sdw 3sgw, 3qd5, 4em8, 3s5p http://search.proquest.com/openview/d609872dcf4202be5c1c8582c3e46eb9/1?pq-origsi... Evaluation of Trypanosoma brucei asparagine synthetase A and ribose 5-phosphate isomerase B as potential drug targets 2015 IMS Loureiro - 2015 - search.proquest.com ... Figure 9. Licensed current therapies against HAT. (A) Structures of drugs used to treat. early and late stage disease. ... PARP procyclic acidic repetitive protein. PDB Protein Data Bank. ... molecules with a conserved core structure of glycosylphosphatidylinositol (GPI) anchored. ...Coccidioides immintis (PDB 3QD5, 3SDW and 3SGW) (Min et al, 2002), Anaplasma phagocytophilum (PDB 4EM8), Clostridium thermocellium (PDB 3PH3, 3PH4 3HEE, and 3HE8) (Jung et al, 2011), Giardia lamblia (PDB 3S5P)
7 3qhd 3k14, 3q8h http://search.proquest.com/openview/bed8a205da9b955be3ea1b46f7b199e9/1?pq-origsi... Design and synthesis of IspD, IspE and IspF enzyme inhibitors of the methylerythritol phosphate pathway 2016 GM Goshu - 2016 - search.proquest.com a fragment hit co-crystallized with Burkholderia pseudomallei (Bp) IspF ( PDB code: 3QHD ).2 Meroterpenoids contain non-isoprenoid structure Thiamine diphosphate (TDP) and Mg2+ bound to active site of E. coli DXS ( PDB code: 2O1S).68 Color: (magnesium) magenta
8 4lgv - http://search.proquest.com/openview/b04b4d65a244a74db03c8611b0eaa999/1?pq-origsi... Multi-Scale Simulation of Electrostatic Channeling 2018 Y Liu - 2018 - search.proquest.com Figure 2-6 (a) Illustration of the proposed channeling complex using a poly(lysine) bridge as an electrostatic surface between hexokinase (HK; PDB 3VF6) and glucose-6-phosphate dehydrogenase (G6PDH; PDB 4LGV). (b) Experimental reaction scheme used to study electrostatic channeling of the charge intermediate (glucose-6-phosphate) across a cationic peptide bridge.
9 4f82 4f4a http://search.proquest.com/openview/afda5488243a36c7973c912298122359/1?pq-origsi... Investigating Imatinib-Resistant Mutations in Abl Kinase 2020 A Lyczek - 2020 - search.proquest.com 10 *(52& Illustration of important structural features of imatini<
10 3gwc - http://search.proquest.com/openview/aa0a9dc6c9a061aa0200e2456abf28ac/1?pq-origsi... Virtual Screening of Novel Potent Molecules Targeting enoyl-ACP reductase as Antitubercular Agents by Molecular Docking studies 2019 V Shivakumar, PM Ramsana, M Risfa- Journal of, 2019 - search.proquest.com Fig 2. Structure and portions nomenclature of linezolid V. Shivakumar et al /J. Pharm. Sci. & Res NO. PDB ID RESOLUTION ENZYMES YEAR 1 2AF6 2.01 Trymidylate synthase 2005 2 2X23 1.80 enoyl-ACP reductase 2010 3 3GWC 1.9 Trymidylate synthase 2009