SSGCID
Seattle Structural Genomics Center for Infectious Disease

Cited Structures: list of articles citing SSGCID structures

We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.

This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.

Cited structures

Manually reviewed citations

# PDB Additional SSGCID structures cited Link Title Year Citation Highlighted abstract
1 3khw - http://www.pjps.pk/wp-content/uploads/pdfs/27/3/SUP-41.pdf 3D protein structure prediction of influenza A virus based on optimization genetic algorithm. 2014 J Gao, PX Jin, HX Xu - Pakistan journal of pharmaceutical sciences, 2014 - pjps.pk ... acid residues Sixty groups of influenza A (H1N1) virus protein were selected from PDB database, 3HTO, 4F15, 3B7E, 3BEQ, 3HTP, 3HTQ, 3HTT, 4EDB, 4B7N, 4B7M, 3M5R, 3M8A, 3LKN, 3QQ4, 3QQ3, 3TI3, 3LZF, 3M6S, 3UBE, 3UBJ, 3UBN-A, 4D9J, 3GBN, 3KHW, 4EDA, 2ZKO ...
2 3eiy - http://www.sciencedirect.com/science/article/pii/S1570963914001095 Asn112 in< i> Plasmodium falciparum</i> glutathione S-transferase is essential for induced reversible tetramerization by phosphate or pyrophosphate 2014 I Quesada-Soriano, C Barn, R Tllez-Sanz - et Biophysica Acta (BBA , 2014 - Elsevier ... the alignment between one of the docking poses for the binding of pyrophosphate to the PfGST tetramer near the Asn112–Lys117 closed-square pattern and three of the pyrophosphatase structures (3Q4W from Thermococcus thioreducens, 3EIY from Burkholderia pseudomallei and 2AUU/1I6T from E. coli), is suspiciously good. ...
3 3d53 - http://repositorium.sdum.uminho.pt/handle/1822/30278 Estudos teóricos e estruturais para o desenvolvimento e síntese de aza-açúcares com atividade melhorada contra a Golgi α-manosidase II 2014 BPAC Pinto - 2014 - repositorium.sdum.uminho.pt ... Ao todo realizaram-se simulações de dinâmica molecular de 9 complexos GMII-ligando com os códigos PDB: 1HXK,2F1A,2OW6,3BLB,3DX4,3DDF,3D53,3EJU,3D4Y ...
4 4ix8 - http://www.sciencedirect.com/science/article/pii/S2211320714000128 Tyrosine aminotransferase from< i> Leishmania infantum</i>: A new drug target candidate 2014 MA Moreno, A Alonso, PJ Alcolea, A Abramov - International Journal for , 2014 - Elsevier ... code: 3DYD) and the mouse TAT (PDB code: 3PDX) ( Mehere et al., 2010). Recently, the structure of LiTAT has been solved to 2.3 (PDB code: 4IX8) ( Moreno et al., 2014). On the basis of this background, the aim of the work is ...
5 3grk - http://onlinelibrary.wiley.com/doi/10.1002/pro.2418/abstract Crystal structures and kinetic properties of enoyl-acyl carrier protein reductase I from Candidatus Liberibacter asiaticus 2014 L Jiang, Z Gao, Y Li, S Wang, Y Dong - Protein Science, 2014 - Wiley Online Library ... henselae (BhFabI, PDB code 4EIT), E. coli (EcFabI, PDB code 2FHS or 1DFI,6,28 B. melitensis (BmFabI, PDB code 3GRK), S. aureus ... reductase glucose-ribitol dehydrogenase from Brucella melitensis (PDB code: 3GRK) is used as the search model. ...
6 4fkx - http://www.biomedcentral.com/1471-2105/15/184 Insights into mechanism kinematics for protein motion simulation 2014 M Diez, V Petuya, LA Martnez-Cruz - BMC , 2014 - biomedcentral.com ... obtained results have been compared with each proteins' structural data, available on the ProteinData Bank (PDB). The results are shown on Table 2. ... mass (Da) in secondary structures secondary structures (PDB) -helix -sheet -helix -sheet ... 4fkx 55.13 34.8 19.7 42 16 ...
7 4ege - http://scripts.iucr.org/cgi-bin/paper?no5060 Crystallization and preliminary X-ray diffraction analysis of Xaa-Pro dipeptidase from Xanthomonas campestris 2014 A Kumar, VN Are, B Ghosh, U Agrawal - Section F: Structural , 2014 - scripts.iucr.org ... Although the structures of XPD43 orthologues from the eubacteria Mycobacterium ulcerans, Bacillus anthracis and Thermotoga maritima (PDB entries 4ege , 3q6d and 2zsg ) have been deposited in the PDB by structural genomics consortia, none of these enzymes have been ...
8 4ex5 - http://dx.plos.org/10.1371/journal.pone.0096198 Structural Basis for the Site-Specific Incorporation of Lysine Derivatives into Proteins 2014 V Flgel, M Vrabel, S Schneider - PloS one, 2014 - dx.plos.org ... A structure of the LysRS from Bacillus stearothermophilus (PDB code 3A74), Bulkholderia thailandensis (PDB code 4EX5 [38]) and Escherichia coli (PDB ... Atomic coordinates were submitted to the Protein Data Bank (http://www.ebi.ac.uk/pdbe/) with the PDB codes: 4CH6 ...
9 2kz0 2mcq http://www.jbc.org/content/289/35/24588.short Structural and spectroscopic insights into BolA-glutaredoxin complexes 2014 T Roret, P Tsan, J Couturier, B Zhang - Journal of Biological Chemistry, 2014 - ASBMB ... and the AtGrxS14-BolA2 apo-heterodimer model (2MMA) are available at the Research Collaboratory for Structural Bioinformatics (RCSB) Protein Data Bank. ... Accordingly, in Ehrlichia chaffeensis and Rickettsia prowazekii BolA structures (PDB entry 2KZ0 and 2MCQ ...
10 3tl6 - http://link.springer.com/chapter/10.1007/978-3-319-24462-4_3 Statistical Analysis of Protein Structural Features: Relationships and PCA Grouping 2014 E Del Prete, S Dotolo, A Marabotti - Intelligence Methods for , 2014 - Springer ... 1ODK, 1PK9, 1QE5, 1TCU, 1V4N, 1VMK, 1XE3, 1Z33, 2P4S, 3KHS, 3OZE, 3SCZ, 3TL6, 3UAV,4D98 ... The legend of the right refers to PDB codes (see Table 1) with the addition ... to con- sidersome structural features as putative markers of the peculiar structure-function properties ...