We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7S5N | 2021 | 0 |
| 7S87 | 2021 | 0 |
| 7SBJ | 2021 | 0 |
| 7SIR | 2021 | 0 |
| 7SWH | 2021 | 0 |
| 7SWK | 2021 | 0 |
| 7SY9 | 2021 | 0 |
| 7SYB | 2021 | 0 |
| 7SZP | 2021 | 0 |
| 7SZS | 2021 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3quv | - | http://www.sciencedirect.com/science/article/pii/S1047847716300016 | Crystal structure of Rv2258c from Mycobacterium tuberculosis H37Rv, an S-adenosyl-l-methionine-dependent methyltransferase | 2016 | HN Im, HS Kim, DR An, JY Jang, J Kim, HJ Yoon - Journal of Structural , 2016 - Elsevier | ... (ii) nucleic acid MTases [Rv2118c (PDB: 1I9G; Gupta et al., 2001), Rv2372c (PDB: 4L69; Kumar et al., 2014), Rv2966c (PDB: 3P9N; Sharma et al., 2015), and MAB_3226c (PDB: 3QUV)] ... |
| 2 | 3qh4 | - | https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0226838 | Crystal structure of PMGL2 esterase from the hormone-sensitive lipase family with GCSAG motif around the catalytic serine | 2020 | KM Boyko, MV Kryukova, LE Petrovskaya- PloS one, 2020 - journals.plos.org | mPMGL2 demonstrated no structural or biochemical differences compared to the wild type enzyme, but with the atomic coordinates of the esterase EstE5 from uncultured bacterium ( PDB ID: 3L1H The wtPMGL2 structure was then used to solve mPMGL2 at 1.43 resolution... Besides the above mentioned enzymes, the only known structure of an enzyme from the GTSAG subfamily of bHSL is an esterase LipW from Mycobacterium marinum (PDB ID 3QH4), whose proposed dimer also shares the same structural feature |
| 3 | 4i1v | 4i1u | http://www.sciencedirect.com/science/article/pii/S1047847714002172 | Crystal structure of Legionella pneumophila dephospho-CoA kinase reveals a non-canonical conformation of P-loop | 2014 | X Gong, X Chen, D Yu, N Zhang, Z Zhu, L Niu… - Journal of structural …, 2014 - Elsevier | ... The first DPCK crystal structure was solved and reported from Haemophilus influenzae (HiDPCK,PDB code 1jjv ( Obmolova et al ... DPCK structures are also available in the PDB, such asBurkholderia vietnamiensis DPCK (BvDPCK, PDB codes 4i1u, 4i1v, Seattle Structural ... |
| 4 | 5vmt | 3hja | https://www.sciencedirect.com/science/article/pii/S0882401018316140 | Crystal structure of GAPDH of Streptococcus agalactiae and characterization of its interaction with extracellular matrix molecules | 2018 | R Nagarajan, S Sankar, K Ponnuraj- Microbial pathogenesis, 2018 - Elsevier | S1). The protein BLAST against Protein Data Bank ( PDB ) led to 97 hits with recently determined 71% and 69% sequence identity with S. pneumoniae (5M6D), Nessiera gonorrhea ( 5VMT ) and S to mixed-holo structure (highest resolution of 1.36 ), the present structure (Apo, 2.6 |
| 5 | 3ftp | 3lls, 3grp | http://www.sciencedirect.com/science/article/pii/S1047847710003497 | Crystal structure of FabG4 from< i> Mycobacterium tuberculosis</i> reveals the importance of C-terminal residues in ketoreductase activity | 2011 | D Dutta, S Bhattacharyya, S Mukherjee, B Saha? - Journal of Structural Biology, 2011 - Elsevier | ... to 356 (loop II), and 395 to 417. Domain II is the catalytic domain and share highest sequence homology with Burkholderia Pseudomallei FabG (PDB: 3FTP, 42% in 248 residues overlap). The active site, deep-seated into the ... |
| 6 | 3dah | - | https://bmcstructbiol.biomedcentral.com/articles/10.1186/s12900-019-0100-4 | Crystal structure of E. coli PRPP synthetase | 2019 | W Zhou, A Tsai, DA Dattmore- Structural, 2019 - bmcstructbiol.biomedcentral.com | Overall, this study details key structural features of an enzyme that catalyzes a critical step in nucleotide metabolism The structure was solved by molecular replacement using the PRPP synthetase from Burkholderia pseudomallei ( PDB 3DAH ) as the search model [14] |
| 7 | 4ffc | - | https://www.sciencedirect.com/science/article/pii/S0006291X19308538 | Crystal structure of -aminobutyrate aminotransferase in complex with a PLP-GABA adduct from Corynebacterium glutamicum | 2019 | J Hong, KJ Kim- Biochemical and biophysical research communications, 2019 - Elsevier | microorganisms, including P. aurescens (PaGABA-AT, PDB code 4ATP), Mycobacterium abscessus (MaGABA-AT, PDB code 4FFC ), and E. coli (EcGABA-AT, PDB code 1SF2) (Fig of CgGABA-AT with that of other GABA-ATs, we superimposed the CgGABA-AT structure and all |
| 8 | 3dmo | 3mpz | http://www.sciencedirect.com/science/article/pii/S0003986111000464 | Crystal structure determination and dynamic studies of< i> Mycobacterium tuberculosis</i> Cytidine deaminase in complex with products | 2011 | ZA S?nchez-Quitian, LFSM Timmers? - Archives of Biochemistry and Biophysics, 2011 - Elsevier | ... Furthermore, in order to verify if these conformations are in agreement with CDA of different organism previously published, we analyzed other 13 CDA structures (PDB access codes: 3IJF, 3MPZ, 1MQ0, 3DMO, 1UX1, 2D30, 1UX0, 1UWZ, 1JTK, 2FR5, 1ZAB, 2FR6, and 3B8F) ... |
| 9 | 4ni5 | - | https://link.springer.com/article/10.1007/s00253-017-8556-2 | Crystal structure and iterative saturation mutagenesis of ChKRED20 for expanded catalytic scope | 2017 | FJ Zhao, Y Jin, Z Liu, C Guo, TB Li, ZY Li- Applied Microbiology, 2017 - Springer | ... model was the monomer of Dehydrogenase from Brucella Suis ( PDB code 4NI5 ; NCBI accession ... Therefore, the determination of the crystal structure of ChKRED20 is crucial and greatly facilitates the ... high level of identity of ChKRED20 to typical SDRs in the PDB database, such ... |
| 10 | 3oq8 | - | http://www.sciencedirect.com/science/article/pii/S1047847716300557 | Crystal structure and functional analysis of isocitrate lyases from Magnaporthe oryzae and Fusarium graminearum | 2016 | Y Park, Y Cho, YH Lee, YW Lee, S Rhee - Journal of structural biology, 2016 - Elsevier | ... The MoICL residues were selected based on the proposed structural and functional features ... In previous, unpublished work, we also observed nearly identical structural changes in Brucella melitensis ICL complexed with malonate (PDB 3OQ8). ... |