We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5SCS | 2022 | 0 |
| 5SCR | 2022 | 0 |
| 5SCQ | 2022 | 0 |
| 5SCP | 2022 | 0 |
| 5SCO | 2022 | 0 |
| 7U2Q | 2022 | 0 |
| 7U2T | 2022 | 0 |
| 4K3Z | 2013 | 0 |
| 4K6C | 2013 | 0 |
| 7U35 | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4g6c | 3laa | https://aip.scitation.org/doi/abs/10.1063/1.5048469 | Blind prediction of protein B-factor and flexibility | 2018 | D Bramer, GW Wei- The Journal of chemical physics, 2018 - aip.scitation.org | MENU. SIGN IN. Sign in/Register. Enter words / phrases / DOI / ISBN / authors / keywords / etc. SEARCH; CITATION SEARCH; ADVANCED SEARCH. Search in: This Publication. search. Advanced |
| 2 | 5t8t | - | https://papers.ssrn.com/sol3/papers.cfm?abstract_id=4651464 | Characterization of a Plant S-Adenosylmethionine Synthetase from Acacia Koa | 2023 | D Borthakur, JT Carrillo- Available at SSRN 4651464 - papers.ssrn.com | structural 8 changes due to mutagenesis (Fig. 8). Species name and PDB numbers of the 9 structures Neisseria gonorrhoeae ( 5T8T ), Lactiplantibacillus plantarum (7R3B). From eukarya |
| 3 | 3ixc | 3oi9, 3mxu, 3laa, 3mdx, 3m1x, 3lqw | http://www.google.com/patents/US20130274441 | General Method for Designing Self-Assembling Protein Nanomaterials | 2013 | D Baker, N King, W Sheffler, T Yeates - US Patent App. 13/802,464, 2013 - Google Patents | ... subunits. The wild-type protein from which O3-33 was derived (PDB ID 3N79) did not assemble to a higher order structure; it eluted from the column mostly as trimers, with a small peak corresponding to a dimer of trimers. Analytical ... |
| 4 | 3e7d | - | http://www.freepatentsonline.com/y2016/0122392.html | POLYPEPTIDES FOR USE IN SELF-ASSEMBLING PROTEIN NANOSTRUCTURES | 2016 | D Baker, JB Bale, NP King - US Patent , 2016 - freepatentsonline.com | ... panel B) comprise 12 pentamers (dark grey) and 30 dimers (light grey), and the I32-28 designmodel and crystal structure (panel C ... Starting proteins were those derived from pentameric, trimeric,and dimeric crystal structures from the Protein Data Bank (PDB), along with a ... |
| 5 | 3enk | - | http://etheses.whiterose.ac.uk/8424/ | Structural and Functional Studies of the Light-Dependent Protochlorophyllide Oxidoreductase Enzyme | 2014 | D Armstrong - 2014 - etheses.whiterose.ac.uk | ... the protein structure. POR isoforms in plants are also notable as components of the prolamellarbodies (PLBs), large paracrystalline structures that are precursors to the thylakoid ... similar structuralfeatures, leading to the production of a structural model for POR. A unique ... |
| 6 | 3gmt | - | http://onlinelibrary.wiley.com/doi/10.1002/prot.22995/full | Identification of functional motions in the adenylate kinase (ADK) protein family by computational hybrid approaches | 2011 | D Armenta-Medina, E P?rez-Rueda? - Proteins: Structure, Function, and Bioinformatics, 2011 - Wiley Online Library | ... PDB ID, Organism, Resolution ?, Chain, %ID. 4ake, Escherichia coli, 2.20, A, 100. 3be4, Cryptosporidium parvum, 1.60, A, 45. 3fb4, Marinibacillus marinus, 2.00, A, 49. 3gmt, Burkholderia pseudomallei, 2.10, B, 66. 2c9y, Homo sapiens, 2.10, A, 49. 1ak2, Bos taurus, 1.92, A, 48. ... |
| 7 | 4wkw | - | http://www.jbc.org/content/290/52/31077.short | The redox state regulates the conformation of Rv2466c to activate the antitubercular prodrug TP053 | 2015 | D Albesa-Jov, N Comino, M Tersa, E Mohorko - Journal of Biological , 2015 - ASBMB | ...E, schematic representation showing the comparison between the crystal structure of Rv2466c-CT-His and the structural homologue from M. leprae (PDB code 4WKW). The canonical thioredoxin folds are shown in orange. The α-helical subdomains of Rv2466c-CT-His and the M. leprae homologue ... |
| 8 | 3d64 | - | http://pubs.acs.org/doi/abs/10.1021/jp3014332 | Hidden Relationship between Conserved Residues and Locally Conserved Phosphate-Binding Structures in NAD (P)-Binding Proteins | 2012 | CY Wu, YH Hwa, YC Chen, C Lim - The Journal of Physical Chemistry, 2012 - ACS Publications | ... Bank (PDB).2 In the absence of structural data, sequence similarity search tools are useful in annotating protein function and in aiding the design of experiments for further studies. ... the NAD(P)-binding domains in the current PDB. ... |
| 9 | 3kc6 | 3khw | https://link.springer.com/chapter/10.1007/978-981-10-8456-0_5 | Structure and Function of Influenza Virus Ribonucleoprotein | 2018 | CY Lo, YS Tang, PC Shaw- Virus Protein and Nucleoprotein Complexes, 2018 - Springer | These structures include PDB : 2VY7, 2VY8, 3KC6 , 3KHW, 2GMO (solution structure of NLS-domain). Structures composing of both domains are also available ( PDB : 2VY6, 3CW4) (Tarendeau et al. 2007; Tarendeau et al. 2008; Kuzuhara et al. 2009; Yamada et al |
| 10 | 3tmg | - | http://jb.asm.org/content/197/21/3378.short | Mechanistic insight into trimethylamine N-oxide recognition by the marine bacterium Ruegeria pomeroyi DSS-3 | 2015 | CY Li, XL Chen, X Shao, TD Wei, P Wang - Journal of , 2015 - Am Soc Microbiol | ... The extended loop comprising the metal ion binding site is colored orange. The PDBcode of each structure is shown. ... TmoX, green; 2REG, cyan; 3TMG, magenta; 3L6H, yellow;1R9L, salmon; 3PPP, light blue; 3R6U, slate; 1SW2, orange. ... |