We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5SCW | 2022 | 0 |
| 5SCV | 2022 | 0 |
| 4MG4 | 2013 | 0 |
| 7UMD | 2022 | 0 |
| 4MI2 | 2013 | 0 |
| 7UME | 2022 | 0 |
| 7US6 | 2022 | 0 |
| 7US9 | 2022 | 0 |
| 7U0U | 2022 | 0 |
| 7U0T | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5dd7 | - | https://repository.up.ac.za/handle/2263/63284 | Structural and functional analysis of thiaminephosphate and homoserine kinases from Mycobacterium tuberculosis | 2016 | CM Ntui - 2016 - repository.up.ac.za | Figure 3.17 X-ray diffraction pattern obtained from ThiL crystal Figure 3.18 The overall structure of MtbThiL Figure 3.20 Crystals obtained from optimization with ThrB Figure 4.1 Structural topology of MtbThiL with other ThiL structures PDB Protein Data Base pI Isoelectric point |
| 2 | 3qat | - | http://dx.plos.org/10.1371/journal.pone.0076021.g006 | A Hybrid NRPS-PKS Gene Cluster Related to the Bleomycin Family of Antitumor Antibiotics in Alteromonas macleodii Strains | 2013 | CM Mizuno, NE Kimes, M L?pez-P?rez, E Aus?? - PloS one, 2013 - dx.plos.org | ... All-vs-all comparisons of the cluster sequences were performed using BLAST. Structural alignment of known protein structures of 1MLA, 3QAT, 2JFD and bleomycin family acyltransferase domains was performed using the PROMALS3D web server [32]. Phylogenetic analysis. ... |
| 3 | 4ggq | - | https://www.sciencedirect.com/science/article/pii/S0959440X18300976 | Enzyme targets for drug design of new anti-virulence therapeutics | 2018 | CM Kahler, M Sarkar-Tyson, EA Kibble- opinion in structural, 2018 - Elsevier | Mip from Burkholderia pseudomallei as a complex with a pipecolic acid derivative (CJ40) ( PDB : 4GGQ ) d) Ribbon diagram of the structure of EptA ( PDB : 5FGN a detailed understanding of the mechanism of substrate binding and catalysis will enable a structure guided approach |
| 4 | 3mmt | - | https://www.sciencedirect.com/science/article/pii/S2352340916304905 | Interaction network and mass spectrometry data of Xanthomonas citri subsp. citri surface proteins from differential proteomic analysis of infectious and non | 2016 | CM Carnielli, J Artier, JCF de Oliveira- Data in brief, 2016 - Elsevier | ID, Gene symbol, ENSEMBL, SWISS-PROT, Protein structure ( PDB ), Conserved domain (CDD), Gene ontology (GO) GO:0003735 structural constituent of ribosome citri (strain 306) GN=XAC3344 PE=3 SV=1, 3mmt Fructose-bisphosphate aldolase, cd00948, FBP_aldolase_I_a |
| 5 | 3mmt | - | http://www.sciencedirect.com/science/article/pii/S2352340916304905 | Interaction network and mass spectrometry data of Xanthomonas citri subsp. citri surface proteins from differential proteomic analysis of infectious and non- | 2016 | CM Carnielli, J Artier, JCF de Oliveira - Data in Brief, 2016 - Elsevier | ... ID, Gene symbol, ENSEMBL, SWISS-PROT, Protein structure (PDB), Conserved domain (CDD),Gene ontology (GO). ... GO:0003735 structural constituent of ribosome, ... citri (strain 306) GN=XAC3344PE=3 SV=1, 3mmt Fructose-bisphosphate aldolase, cd00948, FBP_aldolase_I_a ... |
| 6 | 3tcq | - | http://link.springer.com/article/10.1186/s13029-015-0039-1 | CombAlign: a code for generating a one-to-many sequence alignment from a set of pairwise structure-based sequence alignments | 2015 | CLE Zhou - Source Code for Biology and Medicine, 2015 - Springer | ... there exist crystal structures for several of the filovirus VP40 proteins [ 21 ] (Sudan: 3TCQ, 4LD8;Zaire: 4LDB, 4LDD, 4LDM; Ebola sp.: 1ES6, 1H2C, 1H2D), structure models for ... models for proteinsthat are represented in the Protein Data Bank database (PDB) will naturally ... |
| 7 | 3qk8 | 3q1t | https://repository.library.northeastern.edu/files/neu:m044c4387/fulltext.pdf | Functional Characterization of Structural Genomics Proteins through Computed Chemical Properties, Graph Representation of Active Sites, and Biochemical | 2018 | CL Mills - 2018 - search.proquest.com | These five proteins were purified separately using the same protocol: two putative enoylCoA hydratases from Streptomyces avermitilis (PDB 3GKB, gene echA1; PDB 3H0U, gene echA2), putative 3-hydroxybutyryl-CoA dehydratase from Rhodopseudomonas palustris (PDB 3HIN, gene RPA1786), putative enoyl-CoA hydratase from Mycobacterium avium (PDB 3Q1T, gene MAV_3574), and putative enoyl-CoA hydratase from Mycobacterium marinum (PDB 3QK8, gene echA15). |
| 8 | 5vog | 4mh4 | https://www.tdx.cat/handle/10803/663022 | Phase Combination and its Application to the Solution of Macromolecular Structures: Developing ALIXE and SHREDDER | 2018 | CL Milln Nebot - 2018 - tdx.cat | Table 1 Test set for performance evaluation of SHREDDER and ALIXE... ID PDB 5VOG solvent content |
| 9 | 2ko7 | - | http://search.ebscohost.com/login.aspx?direct=true&profile=ehost&scope=site&auth... | Structure-based Computational analysis of Protein Binding sites for Function and Druggability in Macrophage Infectivity Potentiator (MIP) Protein of Legionella pneumophila | 2013 | CK Naidu, Y Suneetha - Current Trends in Biotechnology & Pharmacy, 2013 - search.ebscohost.com | ... with rapamycin protein (mip) (PDB ID: 2VCD) (Ceymann et al., 2008) was retrieved from the proteindata bank (PDB). ... PDB ID Protein Name ... 2KO7 Chain A Solution structure of peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with Cycloheximide- N ... |
| 10 | 3qxz | 3i3f, 3s6o | https://scholarworks.iupui.edu/handle/1805/17959 | Analysis of Pseudo-Symmetry in Protein Homo-Oligomers | 2018 | CJR Rajendran - 2018 - scholarworks.iupui.edu | Figure 3.2: PDB File format In a PDB file, as mentioned in the above figure 3.2, the Atom type is used to capture the structures are calculated to get the overall structural index Structure Index for Trimers can be calculated by measuring the distance between the original |