We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7TY0 | 2022 | 0 |
| 7TXZ | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5dxd | - | http://www.ejpmr.com/admin/assets/article_issue/1506597354.pdf | HOMOLOGY MODELING AND STRUCTURAL STUDIES OF CELL WALL BINDING PROTEIN -1, 3, GLUCANASE FROM NEUROSPORA CRASSA | 2017 | KA Kumar, SK Gousia, MM Moses, JNL Latha - ejpmr.com | 5dxd .1.A 17.97 monomer HHblits X-ray 1.70 0.29 0.30 Putative beta-glucanase normalized QMEAN score (0.40) and protein size in non-redundant set of PDB structures in the and Schwede, T. Toward the estimation of the absolute quality of individual protein structure models |
| 2 | 3tde | 3s82, 3rv2 | http://www.freepatentsonline.com/9879043.html | Synthesis of non-natural cofactor analogs of S-adenosyl-L-methionine using methionine adenosyltransferase | 2018 | J Thorson, T Huber, J Zhang, S Singh- US Patent 9,879,043, 2018 - freepatentsonline.com | marinum ( PDB code 3RV2), Mycobacterium avium ( PDB code 3S82), Mycobacterium tuberculosis ( PDB code 3TDE ), Rattus norvegicus [36 Protein Data Bank ( PDB ) ID:1RG9), hMAT2A ( PDB ID:2PO2) and hMAT1A ( PDB ID:2OBV) on the hMAT2A homodimeric structure |
| 3 | 3pgz | 3lgj | http://www.freepatentsonline.com/y2015/0191709.html | MODIFIED HELICASES | 2015 | A Heron, J Clarke, R Moysey… - US Patent …, 2015 - freepatentsonline.com | ... In order to assess whether a suitable protein structure exists to use as a “template” to build aprotein model, a search is performed on the protein data bank (PDB) database. ... The sequencealignment and template structure are then used to produce a structural model of the ... |
| 4 | 3pgz | 3lgj | http://www.freepatentsonline.com/y2015/0218629.html | ENZYME CONSTRUCT | 2015 | A Heron, J Clarke, R Moysey… - US Patent …, 2015 - freepatentsonline.com | ... In order to assess whether a suitable protein structure exists to use as a “template” to build aprotein model, a search is performed on the protein data bank (PDB) database. ... The sequencealignment and template structure are then used to produce a structural model of the ... |
| 5 | 3d64 | 3lls, 3qk8, 3ome, 3n58, 3oq8, 3myb, 3p5m, 3sll, 3i4e | http://www.freepatentsonline.com/y2015/0353606.html | PEPTIDOMIMETIC COMPOUNDS | 2015 | RT Skerlj, AC Good - US Patent 20,150,353,606, 2015 - freepatentsonline.com | ... TABLE 2. PDB ID, Key Cysteine residue. 3dp7, CYS10. 1nhw, CYS100. 1q51, CYS102. ... 1x9j,CYS227. 3n58, CYS231. 3d64, CYS238. 3ond, CYS244. ... In general the term helix or helicalis used to refer to any type of helical structure, including 3 10 -helices, -helices and -helices ... |
| 6 | 3e7d | - | http://www.freepatentsonline.com/y2016/0122392.html | POLYPEPTIDES FOR USE IN SELF-ASSEMBLING PROTEIN NANOSTRUCTURES | 2016 | D Baker, JB Bale, NP King - US Patent , 2016 - freepatentsonline.com | ... panel B) comprise 12 pentamers (dark grey) and 30 dimers (light grey), and the I32-28 designmodel and crystal structure (panel C ... Starting proteins were those derived from pentameric, trimeric,and dimeric crystal structures from the Protein Data Bank (PDB), along with a ... |
| 7 | 3ek2 | - | http://www.freepatentsonline.com/y2017/0088822.html | Crystalline Structure of FABI from Burkholderia Pseudomallei | 2017 | NR Krishnamurthy - US Patent , 2017 - freepatentsonline.com | ... Analysis of X-Ray Structure of BpmFabI. ... The structural superposition showed an rms deviationof 1.047 , 0.87 and 1.07 respectively for Bpm (256 Ca atoms; PDB; 3EK2), Ec (251 Caatoms; PDB; 4JQC) and ScFabI (242 Ca atoms; PDB; 4FS3) crystal structures. ... |
| 8 | 3kre | - | http://www.freepatentsonline.com/y2019/0209493.html | NOVEL APPLICATIONS OF SPERMINE AND DERIVATIVES THEREOF | 2019 | W Pan, W Zhu- US Patent App. 16/334,273, 2019 - freepatentsonline.com | Thermotoga maritime (1KUT), Clostridium perfringens (3NUA), Ehrlichia chaffeensis ( 3KRE ), Geobacillus kaustophilus On the basis of the above results, the crystal structure conformations in of Saccharormyces cerevisiae ( PDB : 2CNQ) and Escherichia coli ( PDB : 2GQS) are |
| 9 | 3kre | - | http://www.freepatentsonline.com/y2019/0209499.html | COMPOUNDS WEAKENING SAICAR SYNTHETASE ACTIVITY AND APPLICATIONS | 2019 | W Pan, W Zhu- US Patent App. 16/334,256, 2019 - freepatentsonline.com | 3R9R), Thermotoga maritime (1KUT), Clostridium perfringens (3NUA), Ehrlichiachaffeensis ( 3KRE ), Geobacilluskaustophilus (2YWV basis of the above results, the crystal structure conformations in Saccharormyces cerevisiae ( PDB : 2CNQ) and Escherichia coli ( PDB : 2GQS) |
| 10 | 3fdz | - | http://www.google.com/patents?hl=en&lr=&vid=USPATAPP12753638&id=WYjZAAAAEBAJ&oi=... | SYSTEM AND USES FOR GENERATING DATABASES OF PROTEIN SECONDARY STRUCTURES INVOLVED IN INTER-CHAIN PROTEIN INTERACTIONS | 2010 | AL Jochim, PS Arora - US Patent App. 12/753,638, 2010 - Google Patents | ... 4, 2010 Sheet 5 of 7 US 2010/0281003 Al EXTRACT PROTEIN STRUCTURES WITH GREATER THAN TWO ENTITIES FROM PDB PROTEIN DATA BANK ASSIGN SECONDARY STRUCTURE ACCORDING TO (() AND vj/ANGLES OF PROTEIN BACKBONE CALCULATE ... |