We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 2KHR | 2009 | 5 |
| 2KHP | 2009 | 9 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3gvg | - | http://scripts.iucr.org/cgi-bin/paper?hv5201 | Structural and functional characterization of Mycobacterium tuberculosis triosephosphate isomerase | 2011 | SE Connor, GC Capodagli, MK Deaton? - Acta Crystallographica Section D Biological Crystallography, 2011 - scripts.iucr.org | ... Anal. Biochem. 182, 319-326.] ). Initial crystallization conditions for MtTPI were obtained from the MtTPI-GOL structure deposited in the RCSB (PDB entry 3gvg ; Seattle Structural Genomics Center for Infectious Disease, unpublished work). ... |
| 2 | 3gvg | - | http://www.sciencedirect.com/science/article/pii/S0300908412002696 | Crystal structures of triosephosphate isomerase from methicillin resistant< i> Staphylococcus aureus</i> MRSA252 provide structural insights into novel modes of ligand binding and unique conformations of catalytic loop | 2012 | S Mukherjee, A Roychowdhury, D Dutta, AK Das - Biochimie, 2012 - Elsevier | ... Structural homologues to SaTIM in PDB were searched by the BLASTP server [46 ... sequence alignment of amino acid residues of SaTIM (3M9Y) with TIM from Bacillus stearothermophilus (2BTM), Thermotoga maritima (1B9B), Mycobacterium tuberculosis (3GVG), Vibrio marinus ... |
| 3 | 3gvf | - | http://cdn.intechopen.com/pdfs-wm/46885.pdf | From Tilings to FibersBio-mathematical Aspects of Fold Plasticity | 2014 | C Lesieur, L Vuillon - 2014 - cdn.intechopen.com | ... According to the PDB (Protein Data Bank [30] ) where all available atomic structures of proteins are stored ... x-ray structure of the cholera toxin B pentamer (CtxB5) is shown (PDB code 3CHB). ... Example with the protein 3GVF (PDB code), a D3 symmetry oligomer made of 6 chains ... |
| 4 | 3gvc | - | http://www.sciencedirect.com/science/article/pii/S0960852417303887 | Improved xylitol production by expressing a novel D-arabitol dehydrogenase from isolated Gluconobacter sp. JX-05 and co-biotransformation of whole cells | 2017 | X Qi, H Zhang, TA Magocha, Y An, J Yun, M Yang - Bioresource , 2017 - Elsevier | ... Phyre2 (Kelley et al., 2015) was used to predict the 3D structure of ArDH. ..Another two SDR enzymes, short-chain dehydrogenase reductase (PDB ID: 3GVC) of M. tuberculosis and galactitol dehydrogenase (PDB ID: 2WSB) of R. sphaeroides were also used in the superposition of structure modeling. ... |
| 5 | 3gtd | 3qbp, 3rrp | http://www.teses.usp.br/teses/disponiveis/60/60136/tde-15052014-084203/publico/T... | Structural and functional characterization of Trypanosoma cruzi fumarate hydratase isoforms | 2014 | RAP de Pdua - teses.usp.br | ... TcFHs structural models, built by homology modeling using the Leishmania major fumarase crystalstructure as template, were compared to ... Keywords: fumarase, fumarate hydratase, Chagas disease,selective inhibitors, crystal structure. ... The fainter structures correspond to the ... |
| 6 | 3gtd | 3tv2, 3rd8, 3rrp, 3qbp, 3ome, 3oc7, 3njb, 3njd, 3myb, 3moy, 3he2, 3h81, 4qfe | http://www.sciencedirect.com/science/article/pii/S0734975015000208 | Stereochemistry of enzymatic water addition to C= C bonds | 2015 | BS Chen, LG Otten, U Hanefeld - Biotechnology Advances, 2015 - Elsevier | ... Entry, Name (EC-number), Sources (PDB-number), Types of reaction, Cofactor, Regio- andstereoselectivity. ... sapiens (3E04) Mycobacterium abscessus (3RRP) Sinorhizobium meliloti (4HGV)Thermus thermophilus (1VDK) Rickettsia prowazekii (3GTD) Mycobacterium tuberculosis ... |
| 7 | 3gtd | 3tv2, 3rd8 | http://www.teses.usp.br/teses/disponiveis/60/60136/tde-23052019-093047/en.php | Mapeamento das bases estruturais e suas correlaes com patogenias humanas associadas mutaes na fumarase humana | 2018 | MAA Aleixo - 2018 - teses.usp.br | HsFH crystal structure was solved at 1.8 resolution and identified HEPES molecules complexed with the FumC (1YFE);Saccharomyces cerevisiae (strain ATCC 204508 / S288c) FH (1YFM); Rickettsia prowazekii FH ( 3GTD ), Mycobacterium tuberculosis PDB Protein Data Bank |
| 8 | 3grp | 3f9i | http://dx.plos.org/10.1371/journal.pone.0105751 | BdcA, a Protein Important for Escherichia coli Biofilm Dispersal, Is a Short-Chain Dehydrogenase/Reductase that Binds Specifically to NADPH | 2014 | DM Lord, AU Baran, TK Wood, W Peti, R Page - PloS one, 2014 - dx.plos.org | ... Table 2. BdcA structural homologs as determined by DALI and FFAS. ... Indeed, the same loopsare disordered in the protein whose structure is most similar to BdcA, Bartonella henselae FabG(PDB 3GRP; Table 2) and Rickettsia prowazekii FabG (PDB 3F9I; Table 2) [14]. ... |
| 9 | 3grk | - | http://onlinelibrary.wiley.com/doi/10.1002/pro.2418/abstract | Crystal structures and kinetic properties of enoyl-acyl carrier protein reductase I from Candidatus Liberibacter asiaticus | 2014 | L Jiang, Z Gao, Y Li, S Wang, Y Dong - Protein Science, 2014 - Wiley Online Library | ... henselae (BhFabI, PDB code 4EIT), E. coli (EcFabI, PDB code 2FHS or 1DFI,6,28 B. melitensis (BmFabI, PDB code 3GRK), S. aureus ... reductase glucose-ribitol dehydrogenase from Brucella melitensis (PDB code: 3GRK) is used as the search model. ... |
| 10 | 3grk | 4j07, 3tzq, 4eit, 3s55 | http://search.proquest.com/openview/866f26bea089278c732b5974a08038aa/1?pq-origsi... | Crosslinked helix dimers as versatile scaffolds for mimicking topologically complex epitopes | 2018 | MG Wuo - 2018 - search.proquest.com | 1 1.2 Surface architecture variation among PPIs affect ligandability ..... 3 aliphatic core but lacks any heptad repeat structure and knob/hole packing orientation. ( PDB Codes: 1LLM, 1TMX, 3V3E) .... 57 |