We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 9D32 | 2025 | 0 |
| 9D6W | 2025 | 0 |
| 9D6X | 2025 | 0 |
| 9D6Y | 2025 | 0 |
| 9D6Z | 2025 | 0 |
| 9D71 | 2025 | 0 |
| 9D8S | 2024 | 0 |
| 9D9M | 2024 | 0 |
| 9DAK | 2025 | 0 |
| 9DAZ | 2025 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3qh4 | - | http://www.intechopen.com/books/tuberculosis-current-issues-in-diagnosis-and-man... | Lipid Inclusions in Mycobacterial Infections | 2013 | M Stehr, AA Elamin, M Singh - 2013 - intechopen.com | ... Furthermore the three-dimensional structures of the esterases Rv0045c (PDB 3P2M) [78], Rv1847 (PDB 3S4K), and LipW (3QH4) from M. tuberculosis have been determined, but unfortunately it is not known whether these enzymes are involved in TAG hydrolysis. 3.5. ... |
| 2 | 3enk | - | http://scripts.iucr.org/cgi-bin/paper?cb5020 | Structure and in silico substrate-binding mode of ADP-L-glycero-D-manno-heptose 6-epimerase from Burkholderia thailandensis | 2013 | MS Kim, A Lim, SW Yang, J Park, D Lee? - Acta Crystallographica Section D Biological Crystallography, 2013 - scripts.iucr.org | ... complexed with six different types of substrate have been deposited in the Protein Data Bank (Table 2 ... Cov ++ (%), Cavity volume (? 3 ), Molecular volume (? 3 ), Cavity/molecule, RelatedPDB entries. ... B. pseudomallei (3enk ), UDP- -D-glucose, 7.13, 2.72, 22, 37, 93, 830.8, 181.5, ... |
| 3 | 3k14 | - | http://pubs.acs.org/doi/abs/10.1021/ci400020a | An Extensive and Diverse Set of Molecular Overlays for the Validation of Pharmacophore Programs | 2013 | I Giangreco, DA Cosgrove? - Journal of chemical information and modeling, 2013 - ACS Publications | ... All such algorithms must be validated with respect to known ligand overlays, usually by extracting ligand overlay sets from the Protein Data Bank (PDB). ... This is almost always done by reference to structures drawn from the Protein Data Bank (PDB). ... |
| 4 | 3rqi | - | http://pubs.acs.org/doi/full/10.1021/bi301004v | A Predicted Structure for the PixD-PixE Complex Determined by Homology Modeling, Docking Simulations, and a Mutagenesis Study | 2013 | S Ren, R Sato, K Hasegawa, H Ohta, S Masuda - Biochemistry, 2013 - ACS Publications | ... PixE Homology Modeling The amino acid sequence of PixE was obtained from the DNA DataBank of Japan (entry ... were bacterial response regulators (best 20 defined as those with the smallest E values; PDB entries 3LUF, 3N0R, 3GT7, 1QKK, 3KHT, 3RQI, 2ZQT, 2QZJ ... |
| 5 | 3l56 | - | http://www.hindawi.com/journals/irt/2013/645348/abs/ | 3D Molecular Modelling Study of the H7N9 RNA-Dependent RNA Polymerase as an Emerging Pharmacological Target | 2013 | D Vlachakis, A Karozou, S Kossida - Influenza research and treatment, 2013 - hindawi.com | ... The sequence alignment and the blastp query that followed revealed that the PA domain was available in the PDB databank. ... entry: 4ENF), and the crystal structure of the large C-terminal domain of the polymerase basic protein 2 from influenza A virus (RCSB entry: 3L56). ... |
| 6 | 3ixc | - | http://www.sciencedirect.com/science/article/pii/S002228361300003X | PIM: Phase Integrated Method for Normal Mode Analysis of Biomolecules in a Crystalline Environment | 2013 | M Lu, J Ma - Journal of molecular biology, 2013 - Elsevier | ... There are totally 29 out of the 65 space groups in this case, shown in the leftmost column of Table 1. In the Protein Data Bank (PDB), 73.3% of the structures belong to this case. ... In the PDB, 24.0% of the structures belong to the case. ... |
| 7 | 3fvb | - | http://dx.plos.org/10.1371/journal.pone.0068421 | Factors Controlling the Redox Potential of ZnCe6 in an Engineered Bacterioferritin Photochemical 'Reaction Centre' | 2013 | A Mahboob, S Vassiliev, PK Poddutoori, A van der Est? - PloS one, 2013 - dx.plos.org | ... In addition, this aminoacid is conserved among ferritins from several organisms (PDB ID: 2FKZ, 3E1M, 3IS8, 3FVB) suggesting that it serves to regulate heme potential. Replacing it with an aliphatic residue is expected to eliminate this negative effect. ... |
| 8 | 3nf4 | - | http://dspace.sunyconnect.suny.edu/handle/1951/62666 | Characterization by solution small angle X-ray scattering of the oligomeric state of structural genomics protein targets. | 2013 | K Basil - 2013 - dspace.sunyconnect.suny.edu | ... Then, the smallest asymmetrical unit (ASU) of the crystal is deposited in the Protein Data Bank (PDB)2. ... These proteins, called by the PDB codes 3NF4, 3LKE, 3KFO and 3NF2, were associated with an already known crystal structure listed in the PDB archive. ... |
| 9 | 3gvi | - | http://www.wjpps.com/admin/assets/article_issue/1382162610.pdf | Rhizobitoxine enhances nodulation by inhibiting ethylene synthesis of bradyrhizobium elkanii from lespedeza species: validation by homology modelling and | 2013 | R Vijayan, P Palaniappan, SA Tongmin - World J of pharm and , 2013 - wjpps.com | ... docking studies with the known inhibitor rhizobitoxine. The crystal structure of protein was taken from the Protein Data Bank (entry PDB code: 3GVI). So, we considered the active site residues predicted from the LIGSITE and CASTp has been used for binding with ... |
| 10 | 3ke1 | - | http://pubs.acs.org/doi/full/10.1021/jm3016816 | Torsion Angle Preferences in Druglike Chemical Space: A Comprehensive Guide | 2013 | C Sch?rfer, T Schulz-Gasch, HC Ehrlich? - Journal of medicinal ?, 2013 - ACS Publications | ... The growing number of entries in the Cambridge Structural Database (CSD)(19) and the ProteinData Bank (PDB)(20) allow derivation of more and more reliable and specific rules, and efficient tools exist to do this.(21, 22) Here we present ... PDB entry 3ke1(39) exemplifies ... |