We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 9E9A | 2024 | 0 |
| 9EA0 | 2025 | 0 |
| 9EH8 | 2025 | 0 |
| 9MDE | 2025 | 0 |
| 9MDF | 2025 | 0 |
| 9MDH | 2025 | 0 |
| 9MDT | 2024 | 0 |
| 9MEA | 2024 | 0 |
| 9MEC | 2024 | 0 |
| 9MED | 2024 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4djt | - | http://link.springer.com/chapter/10.1007/978-3-7091-1806-1_2 | The Structure of the G Domain of the Ras Superfamily | 2014 | IR Vetter - Ras Superfamily Small G Proteins: Biology and …, 2014 - Springer | ... series) (24 PDB files, 31 chains). ... The structure of an orthologue of Ran from Encephalitozooncuniculi (4djt, unpublished) has all GTP-interacting motifs including the catalytic glutamineconserved. It was crystallized in the GDP-bound form. ... Structure/Fold Des 15(12):1618–1629. |
| 2 | 3tl6 | - | http://link.springer.com/chapter/10.1007/978-3-319-24462-4_3 | Statistical Analysis of Protein Structural Features: Relationships and PCA Grouping | 2014 | E Del Prete, S Dotolo, A Marabotti - Intelligence Methods for , 2014 - Springer | ... 1ODK, 1PK9, 1QE5, 1TCU, 1V4N, 1VMK, 1XE3, 1Z33, 2P4S, 3KHS, 3OZE, 3SCZ, 3TL6, 3UAV,4D98 ... The legend of the right refers to PDB codes (see Table 1) with the addition ... to con- sidersome structural features as putative markers of the peculiar structure-function properties ... |
| 3 | 4fkx | - | http://link.springer.com/chapter/10.1007/978-3-319-01845-4_13 | Protein Secondary Structure Detection Using Dihedral Angle Parameters Evaluation | 2014 | M Diez, V Petuya, I Mart?nez, A Hern?ndez - The 11th IFToMM International Symposium on Science of Mechanisms and Machines Mechanisms and Machine Science , 2014 - Springer | ... To check the results obtained with the procedure, they have been compared with each proteins' structural data, available on the Protein Data Bank (PDB) and experimentally obtained. ... 1zac. 96.6. 1k9p. 96.62. 3cln. 97.2. 1k20. 93.48. 2peq. 100. 4fkx. 82.35. 3sza. 86.6. ... |
| 4 | 3gmt | - | http://link.springer.com/chapter/10.1007/128_2012_410 | Conformational Heterogeneity Within the LID Domain Mediates Substrate Binding to Escherichia coli Adenylate Kinase: Function Follows Fluctuations | 2013 | TP Schrank, JO Wrabl, VJ Hilser - Dynamics in Enzyme Catalysis: Topics in Current Chemistry, 2013 - Springer | ... PDB structures 1AK2, 1E4V, 2AR7, 2RH5, 2XB4, 3GMT, 3NDP, each pairwise superimposed on 4AKE, the AK(e) structure are displayed. ... All adenylate kinase structures were retrieved from the Protein Data Bank (PDB) [71]. ... |
| 5 | 3qi6 | 3ndn, 3qhx | http://link.springer.com/chapter/10.1007/10_2016_30 | l-Methionine Production | 2016 | J Shim, Y Shin, I Lee, SY Kim - 2016 - Springer | ... 1CS1 [73]) was aligned to MetB of Mycobacterium ulcerans (PDB ID: 3QI6, 3QHX [74 ... jejuni (PDBID:4OC9 [75]), and MetZ of Mycobacterium tuberculosis (PDB ID: 3NDN ... substrate specificity inthese four enzymes is required to establish detailed structurefunction relationships. ... |
| 6 | 3tcq | - | http://link.springer.com/article/10.1186/s13029-015-0039-1 | CombAlign: a code for generating a one-to-many sequence alignment from a set of pairwise structure-based sequence alignments | 2015 | CLE Zhou - Source Code for Biology and Medicine, 2015 - Springer | ... there exist crystal structures for several of the filovirus VP40 proteins [ 21 ] (Sudan: 3TCQ, 4LD8;Zaire: 4LDB, 4LDD, 4LDM; Ebola sp.: 1ES6, 1H2C, 1H2D), structure models for ... models for proteinsthat are represented in the Protein Data Bank database (PDB) will naturally ... |
| 7 | 3ngf | - | http://link.springer.com/article/10.1007/s13205-014-0274-1 | Structure-based function analysis of putative conserved proteins with isomerase activity from Haemophilus influenzae | 2014 | M Shahbaaz, F Ahmad, MI Hassan - 3 Biotech, 2014 - Springer | ... was used for structure- based function annotation and for predicting structural motifs associated ...by DALI server that compares the target structure with known structure submitted in PDB. Thesecondary structure elements are computed from atomic resolution protein structures of ... |
| 8 | 3ng3 | - | http://link.springer.com/article/10.1007/s12275-016-6029-4 | Structural insight for substrate tolerance to 2-deoxyribose-5-phosphate aldolase from the pathogen Streptococcus suis | 2016 | TP Cao, JS Kim, MH Woo, JM Choi, Y Jun, KH Lee - Journal of , 2016 - Springer | ... avium DERA (MaDERA, PDB code: 3NG3) as a search mo- del (Baugh et al., 2015)using the CCP4i program MOLREP (Vagin and Teplyakov, 2010). The FL-SsDERAstructure was used as a search model for SL-SsDERA. ... |
| 9 | 3glq | - | http://link.springer.com/article/10.1007/s12154-016-0155-7 | Structural insight into binding mode of inhibitor with SAHH of Plasmodium and human: interaction of curcumin with anti-malarial drug targets | 2016 | DB Singh, S Dwivedi - Journal of chemical biology, 2016 - Springer | ... Structural superimposition. MatchMaker module of UCSF Chimera 1.9 was used to create asuperposition of PDB structures [14]. ... The six SAHH structure from human (1LI4), P. falciparum(1V8B), M. tuberculosis (2ZJO), B. pseudomallei (3GLQ), T. brucei (3H9U), and B ... |
| 10 | 3k31 | - | http://link.springer.com/article/10.1007/s12154-015-0135-3 | Prediction of protein targets of kinetin using in silico and in vitro methods: a case study on spinach seed germination mechanism | 2015 | SP Kumar, VR Parmar, YT Jasrai… - Journal of Chemical …, 2015 - Springer | ... 3 Enoyl-(acyl-carrier protein) reductase Anaplasma phagocytophilum (strain HZ) 3K31 0.25 0.39 ...similarity methods prioritized probable protein targets available from spinach PDB proteome. ...ligand similarity with caffeine, availability of yeast experi- mental structure complex with ... |