We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7TY0 | 2022 | 0 |
| 7TXZ | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 7k43 | - | https://www.sciencedirect.com/science/article/pii/S2211124722005344 | Structures of Omicron spike complexes and implications for neutralizing antibody development | 2022 | H Guo, Y Gao, T Li, T Li, Y Lu, L Zheng, Y Liu, T Yang- Cell reports, 2022 - Elsevier | The recently reported structural model PDB entry 7T9K (Mannar et al., 2022) was used as an initial template for model building of the Omicron Spike trimer and ACE2. PDB entry 7K43 |
| 2 | 4g6c | - | https://www.nature.com/articles/s41467-022-33180-5 | The evolutionary advantage of an aromatic clamp in plant family 3 glycoside exo-hydrolases | 2022 | S Luang, X Fernndez-Luengo, A Nin-Hill- Nature, 2022 - nature.com | In this context, our aim was to provide direct structural evidence Based on these structures , we evaluate the reactant and that of Bacteroides -glucosidase ( PDB 5JP0) harbours the Glc ... while a β-hexosaminidase from Burkholderia cenocepacia10 folds into a single-domain (α/β)8 sandwich structure. |
| 3 | 7r7n | - | https://www.thelancet.com/journals/laninf/article/PIIS1473-3099(22)00311-5/fullt... | Monoclonal antibody therapies against SARS-CoV-2 | 2022 | D Focosi, S McConnell, A Casadevall- The Lancet Infectious, 2022 - thelancet.com | PDB 7K8M). Antibody binding classes 14 are displayed as mesh space-filling. (C) Structures in complex with a single RBD domain ( PDB 6XEY). Antibody binding classes RBS-A, RBS- ... S2D10633 7r7n RBM class III* |
| 4 | 4y0v | - | https://febs.onlinelibrary.wiley.com/doi/abs/10.1002/1873-3468.14560 | The structure of COPI vesicles and regulation of vesicle turnover | 2023 | RJ Taylor, G Tagiltsev, JAG Briggs- FEBS letters, 2023 - Wiley Online Library | of COPI coat protein structure , we describe how structural and biochemical studies (A) The structure of GDP-bound Arf1 ( PDB 4Y0V ) and GTPbound Arf1 ( PDB 1O3Y). GTP/GDP binding |
| 5 | 6xmy | - | https://www.nature.com/articles/s41467-023-40928-0 | Protein engineering and iterative multimodule optimization for vitamin B6 production in Escherichia coli | 2023 | L Liu, J Li, Y Gai, Z Tian, Y Wang, T Wang, P Liu- Nature, 2023 - nature.com | docked into the binding pocket according to the crystal structure PDB 1PS6 and PDB 6XMY The crystal structure of PdxJ ( PDB 1M5W) showed that the octameric enzyme possesses |
| 6 | 3p96 | - | https://www.sciencedirect.com/science/article/pii/S0223523422008376 | Targeting the phosphoserine phosphatase MtSerB2 for tuberculosis drug discovery, an hybrid knowledge based/fragment based approach | 2023 | M Haufroid, AN Volkov, J Wouters- European Journal of Medicinal, 2023 - Elsevier | model (Fc) solved at 2.05 resolution ( PDB : 3P96 ) [24] and with experimental reflection data (Fo). In the present paper, previously acquired knowledge on the structural and inhibition |
| 7 | 6xdh | - | https://www.cell.com/structure/pdf/S0969-2126(22)00495-6.pdf | Room-temperature structural studies of SARS-CoV-2 protein NendoU with an X-ray free-electron laser | 2023 | RJ Jernigan, D Logeswaran, D Doppler, N Nagaratnam- Structure, 2023 - cell.com | using the crystal structure of NendoU PDB entry 6XDH as the search model (Dranow et al., unpublished results) with all solvent and ligand atoms removed. The structure was refined |
| 8 | 6tys | - | https://www.nature.com/articles/s41467-023-36995-y | Structural basis for antibody recognition of vulnerable epitopes on Nipah virus F protein | 2023 | PO Byrne, BE Fisher, DR Ambrozak, EG Blade- Nature, 2023 - nature.com | The initial model for NiV F was PDB ID 6TYS . Homology models for the Fabs were generated using ABodyBuilder 66 . Initial models were docked into the cryo-EM maps using Chimera. |
| 9 | 4zju | - | https://www.sciencedirect.com/science/article/pii/S1476927123000208 | Computational docking investigation of phytocompounds from bergamot essential oil against Serratia marcescens protease and FabI: Alternative pharmacological | 2023 | KB Lokhande, A Tiwari, S Gaikwad, S Kore- Biology and Chemistry, 2023 - Elsevier | Also, the binding cavity information of the FabI model was taken from the template structure PDB ID: 4ZJU complexes with NAD crystal ligand and the binding cavity of the FabI model |
| 10 | 6tys | 7ki6, 7ki4 | https://www.nature.com/articles/s41467-023-39278-8 | Structure and antigenicity of divergent Henipavirus fusion glycoproteins | 2023 | A Isaacs, YS Low, KL Macauslane, J Seitanidou- Nature, 2023 - nature.com | -EM structures from this work also display clear fusion peptide loop densities, which were only previously seen in structures determined by X-ray crystallography for NiV F ( PDB 5EVM & |