We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 9OBA | 2025 | 0 |
| 9OBC | 2025 | 0 |
| 9OD6 | 2025 | 0 |
| 9P8Z | 2025 | 0 |
| 9PFY | 2025 | 0 |
| 9PG0 | 2025 | 0 |
| 9PG6 | 2025 | 0 |
| 9PGQ | 2025 | 0 |
| 9PL2 | 2025 | 0 |
| 9PMN | 2025 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3sds | - | http://dx.plos.org/10.1371/journal.pone.0031528 | New Insight into the Transcarbamylase Family: The Structure of Putrescine Transcarbamylase, a Key Catalyst for Fermentative Utilization of Agmatine | 2012 | LM Polo, F Gil-Ortiz, A Cant?n, V Rubio - PloS one, 2012 - dx.plos.org | ... the closest structures to that of the PTC subunit those of the subunits of pfOTC, Thermotoga maritima OTC (tmOTC) and hOTC, (Protein Databank files 1PVV ... PDB files are the following for OTCs: human, 1OTH; Ovis aries, 1FB5; Coccidioides immitis, 3SDS; P. furiosus1PVV ... |
| 2 | 3hwi | - | http://www.springerlink.com/index/C13H461841653R88.pdf | Structural insight into the mode of interactions of SoxL from Allochromatium vinosum in the global sulfur oxidation cycle | 2012 | A Bagchi - Molecular Biology Reports, 2012 - Springer | ... like protein) from Mycobacterium tuberculosis (PDB code: 3HWI) with sequence identity of 34 %. ... The predicted structure is similar to the crystal structure of probable thiosulfate sulfurtransferase Cysa2 (rhodanese-like protein) from Mycobacterium tuberculosis (PDB code: 3HWI). ... |
| 3 | 3oks | 3r4t | http://scripts.iucr.org/cgi-bin/paper?tb5051 | Structures of a gamma-aminobutyrate (GABA) transaminase from the s-triazine-degrading organism Arthrobacter aurescens TC1 in complex with PLP and with its external aldimine PLP-GABA adduct | 2012 | H Bruce, A Nguyen Tuan? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2012 - scripts.iucr.org | ... Acta Cryst. D66, 22-25.] ) with a monomer of the transaminase from Mycobacterium smegmatis (PDB entry 3oks ; 63% amino-acid sequence identity to A1R958; Seattle Structural Genomics Center for Infectious Disease, unpublished work) as a search model. ... |
| 4 | 3ek2 | - | https://opus.uni-wuerzburg.de/opus4-wuerzburg/files/7086/Thesis_MariaHirschbeck_... | Structure-based drug design on the enoyl-ACP reductases of Yersinia pestis and Burkholderia pseudomallei | 2012 | MW Hirschbeck - opus.uni-wuerzburg.de | ... In the PDB database an apo structure of BpFabI had already been deposited (PDB code 3EK2), which was crystallized in 10% PEG 6000 and 100 mM HEPES pH 7.0. ... |
| 5 | 3eoo | - | http://www.sciencedirect.com/science/article/pii/S0743731511001948 | Accelerating knowledge-based energy evaluation in protein structure modeling with Graphics Processing Units | 2012 | A Yaseen, Y Li - Journal of Parallel and Distributed Computing, 2011 - Elsevier | ... PDB #of Res #of Atoms GPU Time L1 hits L1 misses Divergent Branches Sorted (??sec) Unsorted (??sec) Sorted/ Unsorted Sorted Unsorted Sorted Unsorted Sorted Unsorted 1PRB 53 419 49 76 ... 1.05 6,88 5 ,7 80 3,83 9 ,5 00 36 4, 04 8 66 6, 21 7 17 9, 78 4 33 ,5 41 3EOO 4,59 ... |
| 6 | 3glq | 3n58 | http://scripts.iucr.org/cgi-bin/paper?tz5003 | High-resolution structures of complexes of plant S-adenosyl-L-homocysteine hydrolase (Lupinus luteus) | 2012 | K Brzezinski, Z Dauter, M Jaskolski - Acta Crystallographica Section D Biological Crystallography, 2012 - scripts.iucr.org | ... Protein Sci. 17, 2134-2144.] ), Burkholderia pseudomallei (PDB entry 3glq ; Seattle Structural Genomics Center for Infectious Disease, unpublished work) and Brucella melitensis (PDB entry 3n58 ; Seattle Structural Genomics Center for Infectious Disease, unpublished work). ... |
| 7 | 3nfw | - | http://www.jbc.org/content/287/31/26213.short | The C-terminal Domain of 4-Hydroxyphenylacetate 3-Hydroxylase from Acinetobacter baumannii Is an Autoinhibitory Domain | 2012 | T Phongsak, J Sucharitakul, K Thotsaporn? - Journal of Biological Chemistry, 2012 - ASBMB | ... Recently, the structure of the reductase of nitrilotriacetate monooxygenase (NTA_MoB; Protein Data Bank code 3NFW) from Mycobacterium thermoresistibile has been reported (43). However, NTA_MoB (189 residues) is smaller than cB from Chelatobacter sp. (335 residues). ... |
| 8 | 3nfw | - | http://scripts.iucr.org/cgi-bin/paper?dp5021 | Crystallization and preliminary X-ray analysis of the reductase component of p-hydroxyphenylacetate 3-hydroxylase from Acinetobacter baumannii | 2012 | W Oonanant, J Sucharitakul, P Chaiyen? - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2012 - scripts.iucr.org | ... All of these structures share the same protein fold and lack the extra C-terminal domain found in C 1 . Recently, the structure of NTA monooxygenase component B from Mycobacterium thermoresistibile (PDB entry 3nfw ; Zhang et al., 2011 [Zhang, Y., Edwards, TE, Begley, DW ... |
| 9 | 3dms | - | http://pubs.acs.org/doi/abs/10.1021/bi300483w | Induced Fit and the Catalytic Mechanism of Isocitrate Dehydrogenase | 2012 | S Gon?alves, SP Miller, MA Carrondo, AM Dean? - Biochemistry, 2012 - ACS Publications | ... To date, there are 27 crystal structures of E. coli isocitrate dehydrogenase in the Protein Data Bank (Table 3). Burkholderia pseudomallei Strain 1710b (UNIPROT Q3JV82), 74.2% identity 3dms 71 1.65 2011 0.92 0.62 ... |
| 10 | 3uam | - | http://www.sciencedirect.com/science/article/pii/S0969212612001426 | Structural Basis for Substrate Targeting and Catalysis by Fungal Polysaccharide Monooxygenases | 2012 | X Li, WT Beeson, CM Phillips, MA Marletta, JHD Cate - Structure, 2012 - Elsevier | ... database (Protein Data Bank [PDB]) contains crystal structures of three CBM33 members, including S. marcescens CBP21 (PDB entry 2BEM) (Vaaje-Kolstad et al., 2005) and two other CBM33s (from Burkholderia pseudomallei and Vibrio cholera, PDB entries 3UAM and 2XWX ... |