SSGCID
Seattle Structural Genomics Center for Infectious Disease

Cited Structures: list of articles citing SSGCID structures

We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.

This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.

Cited structures

Manually reviewed citations

# PDB Additional SSGCID structures cited Link Title Year Citation Highlighted abstract
1 3emj 3ld3, 3lo0, 3gvf, 3fq3 http://www.doria.fi/handle/10024/69593 The Structural Basis for inorganic Pyrophosphatase Catalysis and Regulation 2011 H Tuominen - 2011 - doria.fi ... In addition, the PPase structures from five other species (Anaplasma phagocytophilum, Ehrlichia chaffeensis, Burkholderia pseudomallei, Brucella melitensis and Rickettsia prowazekii) (PDB ID: 3LD3, 3LO0, 3GVF, 3FQ3 and 3EMJ, respectively) obtained in the latest structural ...
2 3ndn - http://pubs.acs.org/doi/abs/10.1021/bi201090n Characterization of the Side-Chain Hydroxyl Moieties of Residues Y56, Y111, Y238, Y338, and S339 as Determinants of Specificity in E. coli Cystathionine beta-Lyase 2011 PH Lodha, SM Aitken - Biochemistry, 2011 - ACS Publications ... figure Scheme 2. Observed Contacts of the PLP-AVG External Aldimine Active Site of eCBL a. a The dotted lines represent putative hydrogen bond distances of ?3.3 ? between heteroatoms. The image was constructed using ChemDraw and PDB entry 1CL2.(3). ...
3 3hwk - http://www.sciencedirect.com/science/article/pii/S104784771000328X Crystal structure of< i> Salmonella typhimurium</i> 2-methylcitrate synthase: Insights on domain movement and substrate specificity 2011 S Chittori, HS Savithri, MRN Murthy - Journal of Structural Biology, 2011 - Elsevier ... In contrast, structural comparison of StPrpC with Mycobacterium tuberculosis GltA1 (MtGltA1; PDB: 3HWK; unpublished results) and Pyrococcus furiosus CS (PfGltA; type-I CS with shorter N-terminal) showed significant similarity in the core structure as well as in the flanking C-terminal extension...
4 3k9w - http://scripts.iucr.org/cgi-bin/paper?gx5183 Structure of Mycobacterium tuberculosis phosphopantetheine adenylyltransferase in complex with the feedback inhibitor CoA reveals only one active-site conformation 2011 T Wubben, AD Mesecar - Acta Crystallographica Section F: Structural Biology and Crystallization Communications, 2011 - scripts.iucr.org ... To date, a number of X-ray crystal structures of PPAT orthologs have been determined [PDB entries 1b6t (Izard & Geerlof, 1999 [Izard, T ... 404, 202-219.] ), 3k9w (Edwards et al., 2011 [Edwards, TE, Leibly, DJ, Bhandari, J., Statnekov, JB, Phan, I., Dieterich, SH, Abendroth, J., Staker ...
5 3qdf - http://scripts.iucr.org/cgi-bin/paper?hc5132 Expression, purification, crystallization and preliminary crystallographic analysis of Cg1458: a novel oxaloacetate decarboxylase from Corynebacterium glutamicum 2011 T Ran, Y Wang, D Xu, W Wang - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2011 - scripts.iucr.org ... was collected at 1.9 ? resolution using synchrotron radiation on beamline BL17U of SSRF, Shanghai, China. Structure-solution attempts by molecular replacement were successful with PDB entries 3qdf or 2dfu as the template. ...
6 3ftp 3lls, 3grp http://www.sciencedirect.com/science/article/pii/S1047847710003497 Crystal structure of FabG4 from< i> Mycobacterium tuberculosis</i> reveals the importance of C-terminal residues in ketoreductase activity 2011 D Dutta, S Bhattacharyya, S Mukherjee, B Saha? - Journal of Structural Biology, 2011 - Elsevier ... to 356 (loop II), and 395 to 417. Domain II is the catalytic domain and share highest sequence homology with Burkholderia Pseudomallei FabG (PDB: 3FTP, 42% in 248 residues overlap). The active site, deep-seated into the ...
7 3cez - http://mss3.libraries.rutgers.edu/dlr/showfed.php?pid=rutgers-lib:35960 Order and disorder in proteins 2011 A Ertekin - 2011 - mss3.libraries.rutgers.edu ... 83 Figure 4.8 The superimposition of 2.6 ? X-ray crystal structure (PDB ID: 3E0O) and sparse-constraint NMR structures for MsrB from B. subtilis. ... NOESY: Nuclear Overhauser Effect Spectroscopy PDB: Protein data bank PSI: Protein Structure Initiative ...
8 3dmo 3mpz http://www.sciencedirect.com/science/article/pii/S0003986111000464 Crystal structure determination and dynamic studies of< i> Mycobacterium tuberculosis</i> Cytidine deaminase in complex with products 2011 ZA S?nchez-Quitian, LFSM Timmers? - Archives of Biochemistry and Biophysics, 2011 - Elsevier ... Furthermore, in order to verify if these conformations are in agreement with CDA of different organism previously published, we analyzed other 13 CDA structures (PDB access codes: 3IJF, 3MPZ, 1MQ0, 3DMO, 1UX1, 2D30, 1UX0, 1UWZ, 1JTK, 2FR5, 1ZAB, 2FR6, and 3B8F) ...
9 3k5p - http://033ce13.netsolhost.com/bioinformation/007/97320630007021.pdf Molecular modeling of human neutral sphingomyelinase provides insight into its molecular interactions 2011 AG Dinesh, PS Suresh, C Thirunavukkarasu - , 2011 - 033ce13.netsolhost.com ... Based on these results, WD repeat-containing protein 5 from Escherichia coli (PDB code: 3EMH)was selected as a ... Furthermore, we have predicted the structure of a ternary complex whichprovides a better understanding of the molecular interactions ... Pcons5 1ZWX 3K5P 3L1W ...
10 3gaf - http://insubriaspace.cineca.it/handle/10277/445 New microbial hydroxysteroid dehydrogenases and their synthetic application for the selective modification of bile acids. 2011 EE Ferrandi - 2011 - insubriaspace.cineca.it ... but it has been hypothesized that binding of bile acids to hydrophobic pocket(s) of the proteasesmay destabilize their structure, making additional ... Bile salts are used for the structural rigidity ofthe steroid skeleton, which allows the formation of stable cavities, and because both ...