We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7KI6 | 2021 | 12 |
| 3S4K | 2011 | 12 |
| 7JZN | 2020 | 12 |
| 4EQY | 2012 | 11 |
| 4LGV | 2013 | 11 |
| 3GKA | 2009 | 11 |
| 3EK2 | 2008 | 11 |
| 3ENK | 2008 | 11 |
| 3EK1 | 2008 | 11 |
| 3UVE | 2011 | 11 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3ke1 | - | http://pubs.acs.org/doi/full/10.1021/jm3016816 | Torsion Angle Preferences in Druglike Chemical Space: A Comprehensive Guide | 2013 | C Sch?rfer, T Schulz-Gasch, HC Ehrlich? - Journal of medicinal ?, 2013 - ACS Publications | ... The growing number of entries in the Cambridge Structural Database (CSD)(19) and the ProteinData Bank (PDB)(20) allow derivation of more and more reliable and specific rules, and efficient tools exist to do this.(21, 22) Here we present ... PDB entry 3ke1(39) exemplifies ... |
| 2 | 3uqb | - | http://onlinelibrary.wiley.com/doi/10.1002/pro.2356/full | To fuse or not to fuse: What is your purpose? | 2013 | MR Bell, MJ Engleka, A Malik, JE Strickler - Protein Science, 2013 - Wiley Online Library | ... The protein was crystallized and the structure determined to 1.9Å resolution with SUMO stillattached (labeled). (PDB ID 3UQB, Fox III, Abendroth, Staker, and Stewart, Seattle StructuralGenomics Center for Infectious Disease, deposited Nov. 2011). ... |
| 3 | 3i4e | - | https://www.biorxiv.org/content/early/2018/05/09/318345.short | Three enzymes and one substrate; regulation of flux through the glyoxylate shunt in the opportunistic pathogen, Pseudomonas aeruginosa. | 2018 | AL Crousilles, SK Dolan, P Brear, DY Chirgadze- bioRxiv, 2018 - biorxiv.org | IDH active site architecture with that of ICD in the AceK-ICD complex from E. coli ( PDB ; 3LCB) reveals that X-ray Diffraction, Structure Determination, and Refinement ICL, IDH and ICD were solved using the structural templates 3I4E (to be published), 4ZDA (to be published) and |
| 4 | 4f2n | - | https://www.mdpi.com/2223-7747/9/8/983 | Three Alkaloids from an Apocynaceae Species, Aspidosperma spruceanum as Antileishmaniasis Agents by In Silico Demo-case Studies | 2020 | D Morales-Jadn, J Blanco-Salas, T Ruiz-Tllez- Plants, 2020 - mdpi.com | of this method can provide insights into the druggable targetome contained in the structural proteome criteria were chosen (vg to be a starting structure , to have a similar structure of a drawn using Marvin Sketch 19.15 converting the format of some structures into pdb files using ... Table A2. Enzymes crystal structures available in PDB server. 4f2n.1.A target SOD |
| 5 | 3he2 | - | http://www.nature.com/articles/nmicrobiol20156 | THPP target assignment reveals EchA6 as an essential fatty acid shuttle in mycobacteria | 2016 | JAG Cox, KA Abrahams, C Alemparte - Nature , 2016 - nature.com | ... Using M. tuberculosis EchA6 (PDB entry 3HE2) as a search model, we determined initial phases by molecular replacement (PHASER39). The models were rebuilt and refined (COOT40, REFMAC541, PHENIX.REFINE42) using non-crystallographic symmetry ... |
| 6 | 3hm0 | - | http://onlinelibrary.wiley.com/doi/10.1002/pro.417/full | Thioesterases: A new perspective based on their primary and tertiary structures | 2010 | DC Cantu, Y Chen, PJ Reilly - Protein Science, 2010 - Wiley Online Library | ... If a crystal structure is known, the Protein Data Bank (PDB, http://www.rcsb.org) accession code also appears. ThYme will be continuously updated: the content of each family will grow as GenBank, UniProt, and PDB do. ... Family, Fold, RMSD ave (?), P ave (%), PDB files. ... |
| 7 | 3ke1 | - | http://onlinelibrary.wiley.com/doi/10.1002/cmdc.201000083/full | Thiazolopyrimidine Inhibitors of 2‐Methylerythritol 2, 4‐Cyclodiphosphate Synthase (IspF) from Mycobacterium tuberculosis and Plasmodium falciparum | 2010 | JG Geist, S Lauw, V Illarionova, B Illarionov, et al. ChemMedChem (2010) 5:1092-1101 | ...[11] T.E. Edwards, D.R. Davies, R. Hartley, W. Zeller, unpublished results. PDB code: 3KE1.... |
| 8 | 3ifg | - | http://dx.plos.org/10.1371/journal.pone.0009280 | The X-ray crystal structure of Escherichia coli succinic semialdehyde dehydrogenase; structural insights into NADP+/enzyme interactions | 2010 | CG Langendorf, TLG Key, G Fenalti, WT Kan? - PloS one, 2010 - dx.plos.org | ... Shortly after the human SSADH structure was published, the structure of SSADH from Burkholderia pseudomallei, without a substrate or cofactor (PDB ID: 3ifg and 3ifh), was deposited into the PDB by the Seattle Structural Genomic Centre for Infectious Disease. ... |
| 9 | 3md7 | - | http://www.biomedcentral.com/1471-2148/11/273 | The UlaG protein family defines novel structural and functional motifs grafted on an ancient RNase fold | 2011 | F Fernandez, F Garces, M L?pez-Estepa? - BMC evolutionary biology, 2011 - biomedcentral.com | ... Furthermore, the recently determined structure of a MBL from Brucella melitensis subsp. abortus (PDB ID 3md7 and structures thereof) (unpublished) has revealed a monomeric enzyme with an Mn2+-dependent active site similar to UlaG and in contrast to the Zn2+ ligand found in all other RNases. . ... |
| 10 | 3rd5 | - | http://brain.oxfordjournals.org/content/early/2013/12/24/brain.awt338.short | The tumour suppressor gene WWOX is mutated in autosomal recessive cerebellar ataxia with epilepsy and mental retardation | 2013 | M Mallaret, M Synofzik, J Lee, CA Sagum, M Mahajnah? - Brain, 2013 - Oxford Univ Press | ... The mutated glycine 372 is located in the C-terminal part of the dehydrogenase/reductase domain of WWOX. The closest homologue of this domain with known 3D structure is 3RD5, a bacterial small dehydrogenase/reductase (pdb code 3RD5). ... |