We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3qi6 | - | http://onlinelibrary.wiley.com/doi/10.1002/cbic.201402489/full | Identification and Characterization of a Methionine γ‐Lyase in the Calicheamicin Biosynthetic Cluster of Micromonospora echinospora | 2015 | H Song, R Xu, Z Guo - ChemBioChem, 2015 - Wiley Online Library | ... with iMOSFILM, and scaled with SCALA (CCP4 suite).35 The initial search model was generatedby pruning non-conserved residues of the Mycobacterium ulcerans cystathionine γ-synthase(MetB; PDB ID: 3QI6) with CHAINSAW.36 The structure of CalE6 was ... |
| 2 | 3gka | - | http://onlinelibrary.wiley.com/doi/10.1002/cbic.201200404/abstract | Crystal Structure Determination and Mutagenesis Analysis of the Ene Reductase NCR | 2012 | S Reich, HW Hoeffken, B Rosche, BM Nestl? - ChemBioChem, 2012 - Wiley Online Library | ... Figure 1. Crystal structure of the ene reductase NCR (PDB ID: 4A3U) dis- played in cartoon representation and showing prosthetic ... in the Supporting Infor- mation), 12-oxophytodienoate reductases 1 and 3 (OPR1 and OPR3) and N-ethylmaleimidine reductase (3GKA) from the ... |
| 3 | 3ftp | - | http://onlinelibrary.wiley.com/doi/10.1002/bit.24956/abstract | Crystallographic analysis and structure-guided engineering of NADPH-dependent Ralstonia sp. alcohol dehydrogenase toward NADH cosubstrate specificity | 2013 | A Lerchner, A Jarasch, W Meining? - Biotechnology and Bioengineering, 2013 - Wiley Online Library | ... The coding sequence for RasADH (starting with Tyr2 according to the UniProt data bank accession number C0IR58) was amplified from the plasmid pEam-RasADH (Lavandera et al. ... 8 homologous ?-ketoacyl-acyl carrier protein reductase of Streptomyces coelicolor (PDB code: ... |
| 4 | 4xgi | - | http://onlinelibrary.wiley.com/doi/10.1002/biot.201700305/full | Discovery of a Potentially New Subfamily of ELFV Dehydrogenases Effective for lArginine Deamination by Enzyme Mining | 2017 | W Wu, Y Zhang, J Huang, Y Wu, D Liu- Biotechnology, 2017 - Wiley Online Library | Active site of glutamate dehydrogenase ( PDB 4XGI ) (A), phenylalanine dehydrogenase ( PDB 1BW9) (B), valine dehydrogenase ( PDB 1LEH) (C Phenylalanine was inserted into the active site of valine dehydrogenase (C) by structure alignment of 1BW9 and |
| 5 | 3ke1 | 4emd, 4ed4, 4dxl, 3q8h | http://onlinelibrary.wiley.com/doi/10.1002/anie.201408487/full | Molecular Recognition in Chemical and Biological Systems | 2015 | E Persch, O Dumele, F Diederich - … Chemie International Edition, 2015 - Wiley Online Library | ... c) Cocrystal structure of ligand 12 bound to TGT (1.68 Å resolution, PDB ID: 3RR4)51 and d ...reorganization of the protein and the changes in the water network solvation occurring upon minorchanges in the ligand structures.52 Without high-resolution structural information, a ... |
| 6 | 3ke1 | 4dxl, 4ed4, 4emd, 3q8h | http://onlinelibrary.wiley.com/doi/10.1002/ange.201408487/full | Molekulare Erkennung in chemischen und biologischen Systemen | 2015 | E Persch, O Dumele, F Diederich - Angewandte Chemie, 2015 - Wiley Online Library | ... c) Bindungsmodus der Liganden 27 und 28 im Komplex mit BpIspF (27: 2.05 Å Auflösung, PDB ID: 3KE1; 28: 1.75 Å Auflösung, PDB ID: 3Q8H). ... |
| 7 | 4weo | - | http://onlinelibrary.wiley.com/doi/10.1002/1873-3468.12834/full | Rational design of Meso2, 3butanediol dehydrogenase by molecular dynamics simulation and experimental evaluations | 2017 | Z Pu, F Ji, J Wang, Y Zhang, W Sun, Y Bao- Febs Letters, 2017 - Wiley Online Library | Sequence and structure alignment of the four BDHs. (A) Structure superposition of the BDHs in Protein Data Bank ( PDB code 1GEG: cyan; 3A28: green; 3WYE: yellow; 4WEO : red). (B) Sequence alignment between the four BDHs |
| 8 | 5idw | - | http://onlinelibrary.wiley.com/doi/10.1002/1873-3468.12683/full | Structure and characterization of a NAD (P) Hdependent carbonyl reductase from Pseudomonas aeruginosa PAO1 | 2017 | S Li, X Teng, L Su, G Mao, Y Xu, T Li, R Liu - FEBS , 2017 - Wiley Online Library | ... monomer contains a large central -sheet of seven -strands that is flanked by three -helices on one side and four -helices on the other, forming a sandwich structure (Fig. ... The closest homologue is the Burkholderia vietnamiensis oxidoreductase ( PDB ID: 5IDW ; Z score 27.2 ... |
| 9 | 4lgv | - | http://onlinelibrary.wiley.com/doi/10.1002/1873-3468.12276/full | The structure of a Trypanosoma cruzi glucose6phosphate dehydrogenase reveals differences from the mammalian enzyme | 2016 | GF Mercaldi, A Dawson, WN Hunter - FEBS letters, 2016 - Wiley Online Library | ... In M. avium and L. mesenteroides G6PDHs (PDB codes 4LGV and 1DPG respectively), thiscysteine is replaced by a valine and an alanine ... The cavity in the T. cruzi enzyme offersopportunities for a structure-based approach to develop novel G6PDH inhibitors. ... |
| 10 | 3ftp | 4lfy | http://oaktrust.library.tamu.edu/handle/1969.1/152696 | Mechanistic and Functional Characterization of Lactonases of COG3618 in the Amidohydrolase Superfamily | 2014 | ME Hobbs - 2014 - oaktrust.library.tamu.edu | ... -strands. Twenty years later, we have a deeper understanding of the structural, catalytic, andmechanistic diversity of this superfamily. ... octahedral geometry (Figure 1.1B). In the crystal structureof the Mn/Mn PTE the alpha Page 18. 6 ... (A) White (pdb code 1hzy) and light blue ... |