We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 3TL6 | 2011 | 1 |
| 3TL3 | 2011 | 3 |
| 3TK8 | 2011 | 3 |
| 3TK1 | 2011 | 7 |
| 3TJR | 2011 | 6 |
| 3TF6 | 2011 | 6 |
| 3TE8 | 2011 | 5 |
| 3TDE | 2011 | 9 |
| 3TCQ | 2012 | 16 |
| 3TAV | 2011 | 3 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3ke1 | 4dxl, 4ed4, 4emd, 3q8h | http://onlinelibrary.wiley.com/doi/10.1002/ange.201408487/full | Molekulare Erkennung in chemischen und biologischen Systemen | 2015 | E Persch, O Dumele, F Diederich - Angewandte Chemie, 2015 - Wiley Online Library | ... c) Bindungsmodus der Liganden 27 und 28 im Komplex mit BpIspF (27: 2.05 Å Auflösung, PDB ID: 3KE1; 28: 1.75 Å Auflösung, PDB ID: 3Q8H). ... |
| 2 | 3ke1 | 4emd, 4ed4, 4dxl, 3q8h | http://onlinelibrary.wiley.com/doi/10.1002/anie.201408487/full | Molecular Recognition in Chemical and Biological Systems | 2015 | E Persch, O Dumele, F Diederich - … Chemie International Edition, 2015 - Wiley Online Library | ... c) Cocrystal structure of ligand 12 bound to TGT (1.68 Å resolution, PDB ID: 3RR4)51 and d ...reorganization of the protein and the changes in the water network solvation occurring upon minorchanges in the ligand structures.52 Without high-resolution structural information, a ... |
| 3 | 3ke1 | - | http://onlinelibrary.wiley.com/doi/10.1002/cmdc.201000083/full | Thiazolopyrimidine Inhibitors of 2‐Methylerythritol 2, 4‐Cyclodiphosphate Synthase (IspF) from Mycobacterium tuberculosis and Plasmodium falciparum | 2010 | JG Geist, S Lauw, V Illarionova, B Illarionov, et al. ChemMedChem (2010) 5:1092-1101 | ...[11] T.E. Edwards, D.R. Davies, R. Hartley, W. Zeller, unpublished results. PDB code: 3KE1.... |
| 4 | 3ke1 | - | http://pubs.acs.org/doi/full/10.1021/jm3016816 | Torsion Angle Preferences in Druglike Chemical Space: A Comprehensive Guide | 2013 | C Sch?rfer, T Schulz-Gasch, HC Ehrlich? - Journal of medicinal ?, 2013 - ACS Publications | ... The growing number of entries in the Cambridge Structural Database (CSD)(19) and the ProteinData Bank (PDB)(20) allow derivation of more and more reliable and specific rules, and efficient tools exist to do this.(21, 22) Here we present ... PDB entry 3ke1(39) exemplifies ... |
| 5 | 3kcq | - | http://jb.oxfordjournals.org/content/154/6/569.short | Structures and reaction mechanisms of the two related enzymes, PurN and PurU | 2013 | G Sampei, M Kanagawa, S Baba? - Journal of Biochemistry, 2013 - Jpn Biochemical Soc | ... The structure of PurN from A. phagocytophilum HZ (PDB ID: 3KCQ) is also similar to those of PurNs described above. ... 3A and B). PurNs from M. tuberculosis (10) and A. phagocytophilum HZ (PDB ID: 3KCQ) also form the same types of dimers as AaPurN and StPurN. ... |
| 6 | 3kc6 | 3khw | https://link.springer.com/chapter/10.1007/82_2014_386 | Molecular determinants of pathogenicity in the polymerase complex | 2014 | G Gabriel, E Fodor- Influenza Pathogenesis and Control-Volume I, 2014 - Springer | were generated with PyMOL using the following PDB accession numbers: PA endonuclease Structures were generated using the following PDB accession numbers: 3KC6 for H5N1 |
| 7 | 3kc6 | - | http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0148432 | Genomic Signatures for Avian H7N9 Viruses Adapting to Humans | 2016 | GW Chen, SM Kuo, SL Yang, YN Gong, MR Hsiao - PloS one, 2016 - journals.plos.org | ... because it is the latest and the only full-length PB2 being resolved thus far [44], comparing withthe other commonly used avian influenza H5N1 PB2 C-terminal domain (CTD) structure (PDBID 3KC6) of 204-aa long covering only positions 538 to 741 of a full-length PB2 protein. ... |
| 8 | 3kc6 | - | http://mbio.asm.org/content/8/3/e00481-17.short | Inhibition of Avian Influenza A Virus Replication in Human Cells by Host Restriction Factor TUFM Is Correlated with Autophagy | 2017 | SM Kuo, CJ Chen, SC Chang, TJ Liu, YH Chen - mBio, 2017 - Am Soc Microbiol | ... (B) Modeling of the A/Anhui/1/2013(H7N9) virus PB2 CTD based on the A/Vietnam/1203/2004( H5N1) virus ( PDB ID 3KC6 ). ... as GTP-binding D1), and thus, the lack of association between chTUFM and PB2 627 E may be due to these in sequence and structure differences in ... |
| 9 | 3kc6 | 3khw | https://link.springer.com/chapter/10.1007/978-981-10-8456-0_5 | Structure and Function of Influenza Virus Ribonucleoprotein | 2018 | CY Lo, YS Tang, PC Shaw- Virus Protein and Nucleoprotein Complexes, 2018 - Springer | These structures include PDB : 2VY7, 2VY8, 3KC6 , 3KHW, 2GMO (solution structure of NLS-domain). Structures composing of both domains are also available ( PDB : 2VY6, 3CW4) (Tarendeau et al. 2007; Tarendeau et al. 2008; Kuzuhara et al. 2009; Yamada et al |
| 10 | 3kc6 | 3khw, 4p9a | https://core.ac.uk/download/pdf/196247958.pdf | Identification and characterization of mammalian signatures of viral adaptation: a computational approach | 2015 | A Marquardt - 2015 - core.ac.uk | Table 2.2: Table showing the in different subtypes used in this work with proteins that have subtype specific structures available with corresponding pdb identifier, which are imple |