We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 8TVE | 2024 | 0 |
| 8TVF | 2024 | 0 |
| 8TVG | 2024 | 0 |
| 8TVH | 2024 | 0 |
| 8TZM | 2023 | 0 |
| 8U0T | 2023 | 0 |
| 8U29 | 2023 | 0 |
| 8U2O | 2023 | 0 |
| 8U2P | 2023 | 0 |
| 8U2Q | 2023 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4ix8 | - | https://www.sciencedirect.com/science/article/pii/S0981942818304790 | Comprehensive genomic analysis of the TYROSINE AMINOTRANSFERASE (TAT) genes in apple (Malus domestica) allows the identification of MdTAT2 conferring | 2018 | H Wang, Q Dong, D Duan, S Zhao, M Li- Plant Physiology and, 2018 - Elsevier | sequence identity for residues 44423), whereas MdTAT3 structure most closely matched that of Leishmania infantum TAT ( PDB ID: 4IX8 .A; RMSD To better understand the gene structure diversity of apple TAT proteins, the intron-exon organization in the coding sequences of |
| 2 | 5u26 | - | https://www.sciencedirect.com/science/article/pii/S0223523423003756 | Comprehensive coverage on anti-mycobacterial endeavour reported during 2022 | 2023 | TM Dhameliya, DD Vekariya, HY Patel- European Journal of, 2023 - Elsevier | reported in 2022 with their mechanism of action, structure activity relationships, along with the key Further, molecular docking revealed compound 76 inhibiting DHFR ( PDB : 5U26 ) and |
| 3 | 7jw0 | 7k45, 7lxy, 7so9, 7sob | https://academic.oup.com/ve/article-abstract/11/1/veaf027/8159764 | Comprehensive analysis of SARS-CoV-2 Spike evolution: epitope classification and immune escape prediction | 2025 | NFB Teruel, M Crown, R Rajsbaum, M Bashton- Virus, 2025 - academic.oup.com | to epitope 3 from structures 7A5R, 6W41, 7LM8, 7S5Q, 7JW0 , 7X1M, and 7R6X. Comparing all the vectors of interaction for S309, we see that one Kappa structure ( PDB 7SOB), from |
| 4 | 3laa | - | http://www.pnas.org/content/109/51/20907.short | Complete fiber structures of complex trimeric autotransporter adhesins conserved in enterobacteria | 2012 | MD Hartmann, I Grin? - Proceedings of the ?, 2012 - National Acad Sciences | ... was conducted with symmetry constraints; the membrane anchor was modeled by using the Hia membrane anchor domain (PDB ID code ... Comparable interaction patterns can be observed for a HIM2 in the partial Burkholderia pseudomallei TAA head structure 3LAA (17) (Fig. ... |
| 5 | 3rd5 | - | http://csc.hcmiu.edu.vn:8080/dspace/handle/123456789/494 | Comparatives study on sequence structure function relationship of human short-chain dehydrogenases/reductases | 2013 | TTN Nu - 2013 - csc.hcmiu.edu.vn | ... Table 1 : PDB code and name of five representative 4. 3rd5 chain A, Retinol dehydrogenase 11... |
| 6 | 3uam | - | http://pubs.acs.org/doi/abs/10.1021/bi5000433 | Comparative study of two chitin-active and two cellulose-active AA10-type lytic polysaccharide monooxygenases | 2014 | Z Forsberg, ?K R?hr, S Mekasha, KK Andersson? - Biochemistry, 2014 - ACS Publications | ... Structural Sequence Alignment PyMod(27) was used to make a structure-based sequence alignment(28) of five AA10-type LPMOs with known structures: EfAA10A (PDB entry 4A02), BpAA10A (PDB entry 3UAM), VcAA10B (PDB entry 2XWX), BaAA10A (PDB entry 2YOX), and ... |
| 7 | 3ijp | - | https://www.sciencedirect.com/science/article/pii/S0304416520302610 | Comparative structural and mechanistic studies of 4-hydroxy-tetrahydrodipicolinate reductases from Mycobacterium tuberculosis and Vibrio vulnificus | 2021 | S Pote, S Kachhap, NJ Mank, L Daneshian- et Biophysica Acta (BBA, 2021 - Elsevier | This paper focuses on structural and mechanistic studies of DapB The structure for DapB has been determined from various bacterial species including Escherichia coli [14], Bartonella henselae [15 Fig. 2. (A) Tetrameric assembly of DapB from V. vulnificus ( PDB ID: 5TEN) |
| 8 | 6vxx | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7505244/ | Comparative molecular docking analysis of the SARS CoV-2 Spike glycoprotein with the human ACE-2 receptors and thrombin | 2020 | P Bhanu, NH Kumar, SH Kumar, M Relekar- , 2020 - ncbi.nlm.nih.gov | PDB ID, Ligand, Binding Pose, Binding Energy (Kcal/mol), RMSD, Receptor, Bond Length ( Figure 1a: Structural representation of 6VXX and thrombin, Figure 1b: Molecular interaction of with the 7th pose, Key - the sticks represents thrombin, the secondary structure represents the |
| 9 | 3lgj | 3pgz | http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=6558165 | Comparative modelling and in-silico drug designing | 2013 | D Kumar, A Sarvate, S Singh? - IEEE Conference on Information & Communication Technologies (ICT), 2013 - ieeexplore.ieee.org | ... Model No. Template PDB ID Percentage of residues in most favoured region of Ramachandran plot Z- score 1 1Z9F 91 -4.9 2 3TQY 93 -4.53 3 1SRU 90 -3.23 ... 8 3PGZ 88 -4.27 9 3ULL 92 -4.06 10 2DUD 95 -4.13 11 1SE8 94 -4.33 12 3LGJ 94 -5.34 13 5MDH 90 -1.48 ... |
| 10 | 5vvw | - | https://www.sciencedirect.com/science/article/pii/S0024320520312194 | Comparative modeling and dynamic simulation of UDP-N-acetylmuramoyl-alanine ligase (MurC) from Mycobacterium tuberculosis through virtual screening | 2020 | MA Isa- Life Sciences, 2020 - Elsevier | The reference sequence (query sequence), searched against PDB and six proteins (1GQQ, 4HV4, 1P31, 2F00, 5VVW and 1J6U of its entire amino acids were in the most favorable region(Table 1). The G-factor of both the model of MurC, minimized model structure and the |