SSGCID
Seattle Structural Genomics Center for Infectious Disease

Cited Structures: list of articles citing SSGCID structures

We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.

This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.

Cited structures

Manually reviewed citations

# PDB Additional SSGCID structures cited Link Title Year Citation Highlighted abstract
1 4e98 - http://onlinelibrary.wiley.com/doi/10.1111/febs.13584/full Sensory properties of the PII signalling protein family 2015 K Forchhammer, J Lddecke - FEBS Journal, 2015 - Wiley Online Library ... In the group of P II -like proteins, the HisG proteins are special because they show P II -likestructures, which are domains of larger proteins. Name, PDB code, Organism, % Seqence Identity,% Structure Similarity, Proteins in cluster. ... CutA1, 4E98, Cryptosporidium parvum, 13, 92, ...
2 3dah - http://link.springer.com/article/10.1007/s00792-014-0726-x Structure of dimeric, recombinant Sulfolobus solfataricus phosphoribosyl diphosphate synthase: a bent dimer defining the adenine specificity of the substrate ATP 2015 RW Andersen, LL Leggio, B Hove-Jensen, A Kadziola - Extremophiles, 2015 - Springer ... 1 3 structure of PRPP synthase of the thermophilic, metha- nogenic archaeon M. jannaschii istetrameric and appears to be built by two dimers ... 2007), and the Gram-negative Betaproteobacterium Burkholderia (Pseudomonas) pseudomallei (PDB code 3DAH) have hex ...
3 2kwl 2lky, 2lol http://repositoriodigital.uns.edu.ar/handle/123456789/2489 Aspectos estructurales y dinmicos en la relajacin de sistemas complejos, con nfasis en agua lquida, sobreenfriada y nanoconfinada 2015 SR Accordino - 2015 - repositoriodigital.uns.edu.ar prctico: previene la agregacin de dos placas de grafeno. Page 9. 9 Abstract In this Thesis we studied, by means of molecular dynamic simulations, the structural and We also determined the geometrical quality of the local structure of these kinds of molecules. In
4 3laa - http://scripts.iucr.org/cgi-bin/paper?mh5193 Selecting soluble/foldable protein domains through single-gene or genomic ORF filtering: structure of the head domain of Burkholderia pseudomallei antigen 2015 LJ Gourlay, C Peano, C Deantonio - Section D: Biological , 2015 - scripts.iucr.org ... 1 [link] , Supplementary Tables S1 and S2). The 1.8 resolution crystal structure of BPSL2063Xtal was solved by molecular replacement using the structure of BpaA (PDB entry 3laa ; Edwardset al., 2010 [Edwards, TE, Phan, I., Abendroth, J., Dieterich, SH, Masoudi, A ...
5 4efz - http://www.jbc.org/content/early/2015/06/16/jbc.M115.652537.short Characterizations of Two Bacterial Persulfide Dioxygenases of the Metallo-β-lactamase Superfamily 2015 SA Sattler, X Wang, KM Lewis, PJ DeHan… - Journal of Biological …, 2015 - ASBMB ... The statistics for the diffraction data are listed in Table 1. Initial phasing of apo- form PpPDO2diffraction data was conducted by molecular replacement with the PDB coordinates of model4EFZ using PHENIX Phaser (18). ... RESULTS Global Structure ...
6 4g6c - http://scitation.aip.org/content/aip/journal/jcp/143/20/10.1063/1.4936132 Multiscale Gaussian network model (mGNM) and multiscale anisotropic network model (mANM) 2015 K Xia, K Opron, GW Wei - The Journal of chemical physics, 2015 - scitation.aip.org ... More importantly, we reveal intrinsic multiscale behavior in protein structures. ... B-factor), ie, theatomic mean-square displacement, obtained in structure determination by ... depends the crystalenvironment, solvent type, data collection condition, and structural refinement procedure ...
7 3m1x - http://www.sciencedirect.com/science/article/pii/S1046202315002078 Protein structure prediction guided by crosslinking restraints–A systematic evaluation of the impact of the crosslinking spacer length 2015 T Hofmann, AW Fischer, J Meiler, S Kalkhof - Methods, 2015 - Elsevier ... Based on the structure of calmodulin (PDB entry 2ksz) the average Cβ–Nz, Cβ–Cγ, Cβ–Cδ,Cβ–N H2 , and Cβ–S G distances ... Structure, Uniprot, Resolution [Å], Molecular weight [Da],Sequence length [aa], Lys portion [%], α-helix [%], β-sheet ... 3m1x, C4LXT9, 1.2, 15882, 138, 7, ...
8 3f9i 3grp https://www.cell.com/cell-chemical-biology/pdf/S1074-5521(15)00442-1.pdf Human ISPD is a cytidyltransferase required for dystroglycan O-mannosylation 2015 M Riemersma, DS Froese, W van Tol, UF Engelke- Chemistry & biology, 2015 - cell.com To provide molecular insight into hISPD properties, we determined the crystal structure of structure factors have been deposited with the PDB under the accession code PDB : 4CVH. Structure similarity of hISPD C-terminal domain, identified using DALI 3f9i 11.7 3.3 137 220 12 FabG R. prowazekii ... 3grp 11.4 3.2 131 209 15 B. henseliae
9 3nrr 3i3r http://www.sciencedirect.com/science/article/pii/S0041010115001002 Homology modeling, vasorelaxant and bradykinin-potentiating activities of a novel hypotensin found in the scorpion venom from Tityus stigmurus 2015 RJA Machado, LGM Junior, NKV Monteiro… - Toxicon, 2015 - Elsevier ... thymidylate synthase from B. bovis with dUMP, Ralitrexed and NADP (PDB ID: 3NRR, ChainA ... Protein Data Bank are listed here in increasing order of identity: X-ray structure dihydrofolatereductase/thymidylate synthase from B. bovis at 2.35 Å resolution (PDB ID: 3I3R ...
10 4h4g 3p0x, 3p4t, 3e5b, 3i4e, 3oib http://search.proquest.com/openview/9b52df086a0858392215929c4a0b2187/1?pq-origsi... Structure of the Vibrio cholerae fatty acid regulator FadR 2015 W Shi - 2015 - search.proquest.com ... 3D6X, 1ZHG, 3DOY, 3DOZ, 3DP0, 3DP1, 3DP2, 3DP3, 3CF8, 3CF9, 3ED0, 3B7J, 3D04, 3AZ9,3AZ8, 3AZA, 3AZB, 4H4G, 2OKH, 2OKI ... (52, 70) and DNA-bound (PDB 1H9T and 1HW2) (69,70) structures are almost identical whereas the ligand-bound structure shows the ...