We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 8F8U | 2022 | 0 |
| 8EWA | 2022 | 0 |
| 8EK7 | 2022 | 0 |
| 8EGN | 2022 | 0 |
| 8EGM | 2022 | 0 |
| 4Z0T | 2015 | 0 |
| 4YWN | 2015 | 0 |
| 8EGL | 2022 | 0 |
| 8EES | 2022 | 0 |
| 8DV0 | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3pgz | 3lgj | http://www.freepatentsonline.com/y2015/0191709.html | MODIFIED HELICASES | 2015 | A Heron, J Clarke, R Moysey… - US Patent …, 2015 - freepatentsonline.com | ... In order to assess whether a suitable protein structure exists to use as a “template” to build aprotein model, a search is performed on the protein data bank (PDB) database. ... The sequencealignment and template structure are then used to produce a structural model of the ... |
| 2 | 4kyx | - | http://www.nature.com/ncomms/2015/150804/ncomms8871/full/ncomms8871.html | Crystal structure, biochemical and cellular activities demonstrate separate functions of MTH1 and MTH2 | 2015 | M Carter, AS Jemth, A Hagenkort, BDG Page… - Nature …, 2015 - nature.com | ... The structure was solved by molecular replacement of the template structure file with PDB ID 4KYX using MolRep, and Arp/wARP was used for building the initial model, followed by iterative building cycles using the Refine program in Phenix ... |
| 3 | 3laa | - | http://scripts.iucr.org/cgi-bin/paper?mh5193 | Selecting soluble/foldable protein domains through single-gene or genomic ORF filtering: structure of the head domain of Burkholderia pseudomallei antigen | 2015 | LJ Gourlay, C Peano, C Deantonio - Section D: Biological , 2015 - scripts.iucr.org | ... 1 [link] , Supplementary Tables S1 and S2). The 1.8 resolution crystal structure of BPSL2063Xtal was solved by molecular replacement using the structure of BpaA (PDB entry 3laa ; Edwardset al., 2010 [Edwards, TE, Phan, I., Abendroth, J., Dieterich, SH, Masoudi, A ... |
| 4 | 4qfh | - | http://www.sciencepubco.com/index.php/ijbas/article/view/4123 | Ligand docking and binding site analysis with pymol and autodock/vina | 2015 | MA Rauf, S Zubair, A Azhar - International Journal of Basic and …, 2015 - sciencepubco.com | ... In recent years, the process of virtual screening technique for docking small molecules into aknown protein structure is a powerful tool for drug ... Enter the name of Protein or enzyme that willbe used for docking studies (For example, Glucose 6 Phosphate or its pdb id 4QFH). ... |
| 5 | 4pca | - | http://www.jbc.org/content/early/2015/05/15/jbc.M115.660829.short | Structure and Biophysical Characterization of the S-adenosylmethionine Dependent O-methyltransferase PaMTH1, a Putative Enzyme Accumulating during … | 2015 | D Chatterjee, D Kudlinzki, V Linhard, K Saxena… - Journal of Biological …, 2015 - ASBMB | ... α2 Page 7. Structure and Biophysical characterization of PaMTH1 7 loop ... Arg232, Asp235).CCoAOMT (Medicago sativa) is (PDB:1SUI) one of the closest structural homologueof PaMTH1 and also crystallizes as a dimer. The dimerization ... |
| 6 | 3l56 | 3khw, 3r2v | https://tel.archives-ouvertes.fr/tel-01485269/ | Dynamique structurale et fonctionnelle du domaine C-terminal de la protine PB2 du virus de la grippe A | 2015 | E Delaforge - 2015 - tel.archives-ouvertes.fr | ...Superposition des structures du 627-NLS de différentes souches sur 2VY6 en gris. A/little yellow-shouldered bat/Guatemala/060/2010 (H17N10) PDB 4WSB (vert), A/mexico/indre4487/2009 (H1N1) PDB 3KHW (orange), A/vietnam/1203/2004 (H5N1) PDB 3L56 (rose), A/Yokohama/2017/03 PDB 3R2V (H3N2) (bleu), ... |
| 7 | 3o0m | 4lsm | https://link.springer.com/content/pdf/10.1038/srep13652.pdf | Dimeric interactions and complex formation using direct coevolutionary couplings | 2015 | RN Dos Santos, F Morcos, B Jana, AD Andricopulo- Scientific reports, 2015 - Springer | Structural Modeling. All the homodimers used in this study were retrieved from Protein Data Bank ( PDB )60. The PDB accession code for each structure is shown in Table 1. ... Histidine triad protein 3O0M 149 ... GAPDH 4LSM 346 Gp_dh_N |
| 8 | 3f9i | 3grp | https://www.cell.com/cell-chemical-biology/pdf/S1074-5521(15)00442-1.pdf | Human ISPD is a cytidyltransferase required for dystroglycan O-mannosylation | 2015 | M Riemersma, DS Froese, W van Tol, UF Engelke- Chemistry & biology, 2015 - cell.com | To provide molecular insight into hISPD properties, we determined the crystal structure of structure factors have been deposited with the PDB under the accession code PDB : 4CVH. Structure similarity of hISPD C-terminal domain, identified using DALI 3f9i 11.7 3.3 137 220 12 FabG R. prowazekii ... 3grp 11.4 3.2 131 209 15 B. henseliae |
| 9 | 4qtp | - | http://kjvr.org/upload/2015/06/25/20150625103448248200.pdf | Mycobacterium avium subsp. paratuberculosis 감염 초기 개체 검출을 위한항원 탐색 및 특성 분석 | 2015 | 박홍태， 박현의， 신민경， 조용일， 유한상 - Korean J Vet Res, 2015 - kjvr.org | ... MAP의 MAP0380 유전자가 coding하고 있는 anti-sigma factor antagonist protein(PDB ID: 4qtp,TM-score ... 1. Three-dimensional structure prediction using I-TASSER server. ... 백질은 MAP1204의p60 domain으로 나타났는데(PDB ID: 3i86, TM-score: 0.547), sequence identity가 100 ... |
| 10 | 3d5t | - | http://onlinelibrary.wiley.com/doi/10.1002/prot.24743/full | Structures of citrate synthase and malate dehydrogenase of Mycobacterium tuberculosis | 2015 | DM Ferraris, R Spallek, W Oehlmann… - Proteins: Structure, …, 2015 - Wiley Online Library | ... thermophilus (4KDE), Thermus flavus (1BDM), Aquaspirillum articum (1B8P), and Burkholderiapseudomallei (3D5T). ... RMSD = 1.4 Å) and malate dehydrogenase from T. flavus (PDB code =1BMD ... The structure of M. tuberculosis malate dehydrogenase shows the presence of a ... |