We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7TY0 | 2022 | 0 |
| 7TXZ | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3gmt | - | http://link.springer.com/chapter/10.1007/128_2012_410 | Conformational Heterogeneity Within the LID Domain Mediates Substrate Binding to Escherichia coli Adenylate Kinase: Function Follows Fluctuations | 2013 | TP Schrank, JO Wrabl, VJ Hilser - Dynamics in Enzyme Catalysis: Topics in Current Chemistry, 2013 - Springer | ... PDB structures 1AK2, 1E4V, 2AR7, 2RH5, 2XB4, 3GMT, 3NDP, each pairwise superimposed on 4AKE, the AK(e) structure are displayed. ... All adenylate kinase structures were retrieved from the Protein Data Bank (PDB) [71]. ... |
| 2 | 3mc4 | - | http://www.sciencedirect.com/science/article/pii/S0959440X13000407 | The cysteine regulatory complex from plants and microbes: what was old is new again | 2013 | JM Jez, S Dey - Current opinion in structural biology, 2013 - Elsevier | ... To date, both hexameric and trimeric SAT have been described in the literature [ 12?, 13, 14 and 15 ] and as unpublished structures (PDB: 3GVD, 3MC4, 3F1X). The hexameric SAT are a dimer of trimers associated through a head-to-head orientation of the N-terminal domains. ... |
| 3 | 2kok | - | http://link.springer.com/article/10.1007/s10142-012-0296-x | A new arsenate reductase involved in arsenic detoxification in Anabaena sp. PCC7120 | 2013 | S Pandey, AK Shrivastava, VK Singh, R Rai… - Functional & integrative …, 2013 - Springer | ... b Structure-based multiple sequence alignment of All0195 homologs. ... 261278552 |
| 4 | 3hhe | - | http://jb.asm.org/content/195/9/2101.short | A genomic signature and the identification of new sporulation genes | 2013 | AB Abecasis, M Serrano, R Alves, L Quintais… - Journal of Bacteriology, 2013 - Am Soc Microbiol | Supplemental Material: B: structure based alignment between the YlzA protein and a putative ribose-5-phosphate isomerase from Bartonella henselae (pdb code 3HHE). Note that that the first 20 residues of YlzA do not align with the B. henselae protein. |
| 5 | 3k14 | - | http://pubs.acs.org/doi/abs/10.1021/ci400020a | An Extensive and Diverse Set of Molecular Overlays for the Validation of Pharmacophore Programs | 2013 | I Giangreco, DA Cosgrove? - Journal of chemical information and modeling, 2013 - ACS Publications | ... All such algorithms must be validated with respect to known ligand overlays, usually by extracting ligand overlay sets from the Protein Data Bank (PDB). ... This is almost always done by reference to structures drawn from the Protein Data Bank (PDB). ... |
| 6 | 3s99 | - | http://mbio.asm.org/content/4/1/e00615-12.short | Evidence for an ABC-Type Riboflavin Transporter System in Pathogenic Spirochetes | 2013 | RK Deka, CA Brautigam, BA Biddy, WZ Liu? - mBio, 2013 - Am Soc Microbiol | ... bind a small molecule between its two lobes. An adenine-binding protein from Brucella melitensis (unpublished PDB accession code 3S99; RMSD = 1.8 ? over 260 comparable C ? atoms) is also structurally similar to TP0298. ... |
| 7 | 4fry | - | http://www.sciencedirect.com/science/article/pii/S0003986113003202 | CBS domains: Ligand binding sites and conformational variability | 2013 | J Ere?o-Orbea, I Oyenarte, LA Mart?nez-Cruz - Archives of biochemistry and biophysics, 2013 - Elsevier | ... At present 120 crystal structures containing 52 different ligands have been reported in the protein data bank (PDB). Of these, 56 entries correspond to eukaryal, 47 to bacterial and 17 to archaeal proteins, respectively. Among ... |
| 8 | 4f3p | - | http://onlinelibrary.wiley.com/doi/10.1111/mmi.12274/full | Molecular and structural basis of glutathione import in Gram-positive bacteria via GshT and the cystine ABC importer TcyBC of Streptococcus mutans | 2013 | B Vergauwen, K Verstraete? - Molecular Microbiology, 2013 - Wiley Online Library | ... binding protein HisJ of Salmonella enterica (Oh et al., 1994; Yao et al., 1994), D177 and R96 in the arginine-binding protein of Salmonella typhimurium (Stamp et al., 2011), and D180 and R98 in the glutamine-binding protein of Burkholderia pseudomallei (PDB code: 4F3P). ... |
| 9 | 3pm6 | - | http://lib.dr.iastate.edu/cgi/viewcontent.cgi?article=4202&context=etd#page=25 | Chapter 2. Aldolase oligomerization relates to specific dynamics essential to carry out its function | 2013 | AR Katebi, RL Jernigan, LHB Center - Building and simulating protein machines, 2013 - lib.dr.iastate.edu | ... used in the multiple sequence alignment, we use subunits from the following PDB Ids: B. anthracis?3Q94; C. immitis?3PM6; C. jejune ... software suite [13-15] to model the missing loop regions of the FBA structures retrieved from the Protein Data Bank [16 ... E. coli FBA: PDB Id?1ZEN ... |
| 10 | 3fdz | - | http://oai.dtic.mil/oai/oai?verb=getRecord&metadataPrefix=html&identifier=ADA594... | Metabolic Signaling and Therapy of Lung Cancer | 2013 | J Chen - 2013 - DTIC Document | ... PGAM1. (A) Cartoon representation of 2,3- BPG location from structure 3FDZ superposed on PGAM1 (PDB ID: 1YFK). H11 and Y92 are directly proximal to and Y26 is also close to cofactor (2,3-BPG)/substrate (3-PG) binding site. ... |