We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 8CSO | 2022 | 0 |
| 7V0H | 2022 | 0 |
| 7USB | 2022 | 0 |
| 7US9 | 2022 | 0 |
| 7US6 | 2022 | 0 |
| 7UME | 2022 | 0 |
| 4MI2 | 2013 | 0 |
| 7UMD | 2022 | 0 |
| 4MG4 | 2013 | 0 |
| 9ZK1 | 2025 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 6uj5 | - | https://www.cell.com/cell-chemical-biology/abstract/S2451-9456(25)00130-8 | Pantothenate kinase is an effective target for antifungal therapy | 2025 | J Regan, C DeJarnette, P Reitler, S Gihaz- Cell Chemical, 2025 - cell.com | cerevisiae experimental structure ( PDB : 6UJ5 ), we performed molecular docking analysis with MNS. These studies suggest that the MNS binding site overlaps with that of pantothenate |
| 2 | 3f9i | 3grp | https://www.cell.com/cell-chemical-biology/pdf/S1074-5521(15)00442-1.pdf | Human ISPD is a cytidyltransferase required for dystroglycan O-mannosylation | 2015 | M Riemersma, DS Froese, W van Tol, UF Engelke- Chemistry & biology, 2015 - cell.com | To provide molecular insight into hISPD properties, we determined the crystal structure of structure factors have been deposited with the PDB under the accession code PDB : 4CVH. Structure similarity of hISPD C-terminal domain, identified using DALI 3f9i 11.7 3.3 137 220 12 FabG R. prowazekii ... 3grp 11.4 3.2 131 209 15 B. henseliae |
| 3 | 5vxt | - | https://www.cell.com/cell-reports/fulltext/S2211-1247(24)01353-6 | Biochemical and structural characterization of enzymes in the 4-hydroxybenzoate catabolic pathway of lignin-degrading white-rot fungi | 2024 | E Kuatsjah, A Schwartz, M Zahn, K Tornesakis- Cell Reports, 2024 - cell.com | Another close structural homolog is a catechol 1,2-dioxygenase from the bacterium Burkholderia ambifaria with bound catechol ( PDB : 5VXT ) with 25% sequence identity with the fungal |
| 4 | 7lxz | 7ly2 | https://www.cell.com/cell-reports/pdf/S2211-1247(21)01401-7.pdf | Neutralizing antibody 5-7 defines a distinct site of vulnerability in SARS-CoV-2 spike N-terminal domain | 2021 | G Cerutti, Y Guo, P Wang, MS Nair, M Wang, Y Huang- Cell reports, 2021 - cell.com | We produced a structural superposition of all NTD-directed antibodies deposited in the PDB , superposed on NTD Ca atoms, in the context of SARS-CoV-2 spike trimer (Figure 2A). ... Figure S1. Sequence alignment for 5-7 with their corresponding germline genes, Related to Figures 1 and 2. 7LXZ McCallum et al., 2021 |
| 5 | 7jv2 | 7jva | https://www.cell.com/cell-reports/pdf/S2211-1247(21)01652-1.pdf | Structural analysis of receptor binding domain mutations in SARS-CoV-2 variants of concern that modulate ACE2 and antibody binding | 2021 | D Mannar, JW Saville, X Zhu, SS Srivastava- Cell reports, 2021 - cell.com | See Table S2 for PDB entries included in this analysis. (D) Structural overlap of all antibodies selected on the SARSCoV-2 RBD. Mutational positions within the RBD are highlighted. (E) |
| 6 | 7ly3 | 7ral | https://www.cell.com/cell-reports/pdf/S2211-1247(22)00798-7.pdf | Cryo-EM structures of SARS-CoV-2 Omicron BA. 2 spike | 2022 | V Stalls, J Lindenberger, SMC Gobeil, R Henderson- Cell Reports, 2022 - cell.com | The structures used in this analysis included PDB IDs 7KE8 (G6141), 7KE6 (G6142), 7KE7 (G6143), 7KE4 (G6144), 7LWS (Alpha), 7LYL (Beta), 8CSA (TM), 7LWL (Mk1), 7LWI (Mk2), |
| 7 | 7lxw | 7lxx, 7ly0, 7soa, 7sof, 7ly3 | https://www.cell.com/cell-reports/pdf/S2211-1247(22)01868-X.pdf | Structural analysis of receptor engagement and antigenic drift within the BA. 2 spike protein | 2023 | JW Saville, D Mannar, X Zhu, AM Berezuk, S Cholak- Cell Reports, 2023 - cell.com | Cryo-EM structures of the BA.2 S-human ACE2 complex and of the extensively mutated BA.2 Our analysis reveals structural mechanisms underlying the antigenic drift in the rapidly |
| 8 | 6q04 | - | https://www.cell.com/cell/fulltext/S0092-8674(24)00101-6?uuid=uuid%3A25e6b683-fb... | Rapid simulation of glycoprotein structures by grafting and steric exclusion of glycan conformer libraries | 2024 | YX Tsai, NE Chang, K Reuter, HT Chang, TJ Yang- Cell, 2024 - cell.com | (A) SAXS molecular envelop and structure of N-cadherin ( PDB : 3Q2W) modeled with (D) SAXS molecular envelop and structure of EC4-EC5 (taken from PDB : 3Q2W) modeled ... MERS-CoV S structure in complex with 5-N-acetyl neuraminic acid Park et al.90 PDB: 6Q04 |
| 9 | 4ol9 | - | https://www.cell.com/heliyon/fulltext/S2405-8440(24)11679-9?uuid=uuid%3A33150438... | Exploring Indonesian actinomycete extracts for anti-tubercular compounds: Integrating inhibition assessment, genomic analysis, and prediction of its target by | 2024 | A Nurkanto, JCE Tampubolon, MF Ewaldo, AL Putri- Heliyon, 2024 - cell.com | The resulting structures that underwent energy minimization through the MM2 method were saved in PDB format. Additionally, non-polar hydrogen atoms within the ligands were ... We selected 21 enzymes target as follow: Mt enoyl reductase (InhA; MtInhA; PDB ID: 4TRJ),...Mt 2-dehydropantoate 2-reductase (PanE; MtPanE; PDB ID: 4OL9), |
| 10 | 7jzn | - | https://www.cell.com/heliyon/fulltext/S2405-8440(25)01465-3?uuid=uuid%3Acd981904... | Novel method for prioritizing protein binding sites using pocket analysis and MD simulations | 2025 | AD Biswas, E Sabato, S Vittorio, P Aletayeb, A Pedretti- Heliyon, 2025 - cell.com | We picked a list of 8 resolved SARS-CoV-2 spike structures from the PDB by & 3 of 7JZN . (B) The spike protein conformational states are superimposed for each pair, with one structure |