We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7TY0 | 2022 | 0 |
| 7TXZ | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3ixc | 3oi9, 3mxu, 3laa, 3mdx, 3m1x, 3lqw | http://www.google.com/patents/US20130274441 | General Method for Designing Self-Assembling Protein Nanomaterials | 2013 | D Baker, N King, W Sheffler, T Yeates - US Patent App. 13/802,464, 2013 - Google Patents | ... subunits. The wild-type protein from which O3-33 was derived (PDB ID 3N79) did not assemble to a higher order structure; it eluted from the column mostly as trimers, with a small peak corresponding to a dimer of trimers. Analytical ... |
| 2 | 3ek2 | - | http://www.google.com/patents/US20160376235 | Pyridone FabI Inhibitors and Uses Thereof | 2016 | P Tonge - US Patent App. 15/130,365, 2016 - Google Patents | ... Selected residues of the saFabI-NADPH-PT173 structure (gray, subunit F) and the centralhydrogen ... Structural differences between diphenyl ether and pyridone ternary complexes. ... residueroot mean square deviation (RMSD) values between the triclosan-bound (PDB code 4ALI ... |
| 3 | 3tsc | - | http://www.google.com/patents/US20170098030 | System and method for generating detection of hidden relatedness between proteins via a protein connectivity network | 2015 | Z Frenkel - US Patent App. 15/310,401, 2015 - Google Patents | ... The 20-amino acid fragments are derived from proteins with Protein Data Bank (PDB) codes 3tsc (chain A, starting position ALA 93) and lyxm (chain A, starting position ASP 96). These proteins have similar fold, and the RMSD (root-mean-square-deviation) function between the structures of the fragments is 0.85A, meaning that the structures are very similar, as shown in FIG. 4 ... |
| 4 | 3i4e | 3p0x, 3oq8, 3eol, 3e5b | http://www.hindawi.com/journals/bmri/2015/895453/abs/ | Potential Inhibitors for Isocitrate Lyase of Mycobacterium tuberculosis and Non-M. tuberculosis: A Summary | 2015 | YV Lee, HA Wahab, YS Choong - BioMed Research International, 2015 - hindawi.com | ... 1F8M [5]], Escherichia coli [PDB id: 1IGW [6]], Burkholderia pseudomallei [PDB id: 3I4E (paperunpublished ... crystal structure using Ligand Fit module of Discovery Studio 2.1 software (PDB id1F8M ... View at Scopus; V. Sharma, S. Sharma, KHZ Bentrup et al., “Structure of isocitrate ... |
| 5 | 3u03 | - | http://www.hindawi.com/journals/ipid/2012/843509/abs/ | Pyoverdine, the Major Siderophore in Pseudomonas aeruginosa, Evades NGAL Recognition | 2012 | ME Peek, A Bhatnagar, NA McCarty? - Interdisciplinary Perspectives on Infectious Diseases, 2012 - hindawi.com | ... Recently, Strong and coworkers crystallized NGAL bound to pyochelin (PDB 3U03, deposited at the RCSB protein data bank) and the crystal structure clearly shows that pyochelin docks inside the calyx of NGAL but without binding avidly. ... |
| 6 | 3l56 | - | http://www.hindawi.com/journals/irt/2013/645348/abs/ | 3D Molecular Modelling Study of the H7N9 RNA-Dependent RNA Polymerase as an Emerging Pharmacological Target | 2013 | D Vlachakis, A Karozou, S Kossida - Influenza research and treatment, 2013 - hindawi.com | ... The sequence alignment and the blastp query that followed revealed that the PA domain was available in the PDB databank. ... entry: 4ENF), and the crystal structure of the large C-terminal domain of the polymerase basic protein 2 from influenza A virus (RCSB entry: 3L56). ... |
| 7 | 3gwc | - | http://www.ingentaconnect.com/content/ben/cchts/2016/00000019/00000001/art00004 | An In Silico Approach for Identification of Potential Anti-Mycobacterial Targets of Vasicine and Related Chemical Compounds | 2016 | A Kashyap Chaliha, D Gogoi, P Chetia - chemistry & high , 2016 - ingentaconnect.com | ... (Table 5). Chemical similarity search of vasicine using PubChem Structure Search yielded ... SlNo. PDB ID Protein Name Protein Name (Short) Gene Name Resolution (A ... 9 3FV5 E. coliTopoisomerase IV Topo IV b3030 1.80 10 3GWC Thymidylate synthase X ThyX Rv2754c 1.90 ... |
| 8 | 2ke0 | - | http://www.ingentaconnect.com/content/ben/cmc/2010/00000017/00000015/art00005 | In silico prediction of binding sites on proteins | 2010 | S Leis, S Schneider, M Zacharias - Current medicinal chemistry, 2010 - ingentaconnect.com | ... 15 Leis et al. Table 3. Protein Test Structures pdb entry molecule state ligand Rmsd (?)b 2ANO E.coli dihydrofolate reductase bound Inh. MS-SH08-17 0 ... 1FKS_2VCD 1FKS based on 2VCD structure homology --- 2.3 1FKS_2KE0 1FKS based on 2KE0 structure homology --- 2.6 ... |
| 9 | 2ke0 | 2l2s, 3k2c, 2ko7 | http://www.ingentaconnect.com/content/ben/cmc/2011/00000018/00000035/art00003 | Insights into immunophilin structure and function | 2011 | C Lucke, M Weiwad - Current medicinal chemistry, 2011 - ingentaconnect.com | ... 18, No. 35 L?cke and Weiwad Table 1. List of FKBP Structure Coordinates Available in the RCSB Database name organism UniProtKB residues mutation(s) PDB ID method resolution ligand(s) reference ... FKBP burkholderia pseudomallei Q63J95 1-113 2KE0 NMR SSGCIDa ... |
| 10 | 3men | - | http://www.ingentaconnect.com/content/ben/cpd/2013/00000019/00000004/art00003 | Modulation of epigenetic targets for anticancer therapy: clinicopathological relevance, structural data and drug discovery perspectives | 2013 | F Andreoli, A Jorge Moura Barbosa - Current , 2013 - ingentaconnect.com | ... Current Pharmaceutical Design, 2013, Vol. 19, No. 4 583 Table 1. Available 3D Structure ofHuman and Bacterial HDACs Class Name Organism PDB ID Ligand Domain Reference ... [262]Bacterial APAH Burkholderia pseudomallei 3MEN Catalytic Domain [263] a PDB ligand ID ... |