SSGCID
Seattle Structural Genomics Center for Infectious Disease

Cited Structures: list of articles citing SSGCID structures

We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.

This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.

Cited structures

Manually reviewed citations

# PDB Additional SSGCID structures cited Link Title Year Citation Highlighted abstract
1 5j3b - https://www.researchsquare.com/article/rs-51959/latest.pdf How Signaling Games Explain Mimicry at Many Levels: From Viral Epidemiology to Human Sociology 2020 W Casey, S Massey, B Mishra - 2020 - researchsquare.com Here we will further illustrate and discuss the sur- prisingly diverse dynamics expressed for a variety of population structures The process architecture is simple, but worth noting that each type in the population structure forms a component in the evolution processes ... factor (1EH1), Acinetobacter baumannii elongation factor P (5J3B), T.thermophilus
2 6mg6 - https://www.researchsquare.com/article/rs-561386/latest.pdf Genome Mining, Phylogenetic and Structural Analysis of Bacterial Nitrilases for the Biodegradation of Nitrile Compounds 2021 R Salwan, V Sharma, S Das - 2021 - researchsquare.com ( PDB :1EMS), Helicobacter pylori ( PDB : 6MG6 ), Mus musculus ( PDB : 2W1V), Pyrococcus abyssi ( PDB : 3WUY) has already been reported. However, with most of the nitrilases, the crystal structure had been resolved, came
3 3h81 - https://www.rug.nl/research/portal/files/48620248/Chapter_2.pdf Genomics-based discovery and engineering of biocatalysts for conversion of amines 2017 MM Heberling, CP Postema, TJ Meijer, M Otzen - rug.nl peptides and macrolactam polyketides through de novo biosynthesis [1,2]. The structural diversity and The structure of -Val (or other dialkylglycines) restricts the diversity of feasible ID) and an enoyl-CoA hydratase from Mycobacterium tuberculosis ( PDB : 3H81 , 62%), as seen
4 5i7w - https://www.rug.nl/research/portal/files/79350072/Chapter_1.pdf Omega transaminases: discovery, characterization and engineering 2019 CM Palacio - 2019 - rug.nl (7), who grouped the enzymes in superfamilies by structural similarities and named the superfamilies after the PLP enzyme of which the crystal structure was determined first. The PLP fold-type classification system of Grishin et al Brucella suis, pdb 5I7W )
5 7jv2 7k43, 7jva, 7km8 https://www.science.org/doi/abs/10.1126/science.abh1139 Structural and functional ramifications of antigenic drift in recent SARS-CoV-2 variants 2021 M Yuan, D Huang, CCD Lee, NC Wu, AM Jackson- Science, 2021 - science.org We therefore investigated the structural and functional 4 ( PDB 6XEY) (27) are shown in pink and light pink, respectively; S2M11 ( PDB 7K43) (30) in orange and yellow; C121 ( PDB 7K8X
6 7k45 - https://www.science.org/doi/abs/10.1126/science.abm5835 SARS-CoV-2 Beta variant infection elicits potent lineage-specific and cross-reactive antibodies 2022 SM Reincke, M Yuan, HC Kornau, VM Corman- Science, 2022 - science.org structural basis of this public broadly reactive clonotype, we determined crystal structures of We compared the structures of CS44 and CV07-287 with other published VH1-58 antibodies... Structures of VH1-58 antibodies from other studies are shown for comparison, including COVOX-253 (PDB 7BEN), S2E12 (PDB 7K45),
7 6ws6 - https://www.science.org/doi/abs/10.1126/scitranslmed.abj7125 A broadly cross-reactive antibody neutralizes and protects against sarbecovirus challenge in mice 2021 DR Martinez, A Schfer, S Gobeil, D Li- Science translational, 2021 - science.org Binding and structural analysis showed high affinity binding of DH1047 to an epitope that is ACE2 (yellow surface representation, PDB 6VW1) binding to RBD is sterically hindered by
8 7ral - https://www.science.org/doi/abs/10.1126/scitranslmed.adn5651 Nonstabilized SARS-CoV-2 spike mRNA vaccination induces broadly neutralizing antibodies in nonhuman primates 2025 RD Malewana, V Stalls, A May, X Lu- Science Translational, 2025 - science.org Our structural studies identified the DH1193 epitope as one of these conserved epitopes on accession numbers 8DPZ, 8DTK, and 7RAL in the PDB . Biospecimens, proteins, DNA, and
9 3gaf - https://www.sciencedirect.com/science/article/abs/pii/S2468823123005060 Design of St-2-2 7α-HSDH mutants for altering substrate preference and thermostability 2023 Y Pan, S Tang, L Zhu, D Lou, J Tan, B Wang- Available at SSRN 4429366 - papers.ssrn.com -helix structure , whereas the 226 C-terminus of EC 7-HSDH and the adjacent loop structure structure analysis stimulated our interest in studying the effect of the C-terminus 229 ... Structural alignments of St-2- 246 2 (slate blue) and crystallized 7α-HSDHs from Escherichia coli (7eny, gray) [41], 247 Clostridium absonum (5epo, salmon red) [22], Brucella Melitensis (3gaf, yellow) [42],
10 4qji - https://www.sciencedirect.com/science/article/pii/B9780128179031000097 Natural products encompassing antituberculosis activities 2020 A Monga, A Sharma- Studies in Natural Products Chemistry, 2020 - Elsevier The structure and composition of the cell envelope of M. tuberculosis are distinguished from that of other kinds of prokaryotes S. No. PDB ID, Title, Anti-TB agents 1OY0, Pantothenate kinase, 1e. 4QJI , Phosphopantothenate-cysteine ligase, Phosphopantetheine