We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 7S5N | 2021 | 0 |
| 7S5O | 2022 | 6 |
| 7S87 | 2021 | 0 |
| 7SBC | 2021 | 5 |
| 7SBJ | 2021 | 0 |
| 7SIQ | 2021 | 1 |
| 7SIR | 2021 | 0 |
| 7SKB | 2021 | 2 |
| 7SKZ | 2022 | 3 |
| 7SL5 | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4wkw | - | https://pubs.acs.org/doi/abs/10.1021/acsinfecdis.7b00111 | Identification of a Mycothiol-Dependent Nitroreductase from Mycobacterium tuberculosis | 2018 | A Negri, P Javidnia, R Mu, X Zhang- ACS infectious, 2018 - ACS Publications | Compared with published crystal structures of Rv2466c (PDB ID: 4NXI, 4ZIL) and the M. leprae homologue (PDB ID: 4WKW), there were significant conformational changes in one subunit of our structure |
| 2 | 4wny | - | https://www.biorxiv.org/content/10.1101/2020.10.03.324806v1.abstract | A Universal Stress Protein upregulated by hypoxia may contribute to chronic lung colonisation and intramacrophage survival in cystic fibrosis | 2020 | A O'Connor, R Berisio, M Lucey, K Schaffer, S McClean- bioRxiv, 2020 - biorxiv.org | abilities. 253 To identify structural determinants responsible for the different behaviours of USP76 and 254 USP92, in particular their different abilities to bind to epithelial cells, we used homology 255 modelling and analysed resulting structures the best template was the BupsA stress protein from Burkholderia pseudomallei (PDB code 563 4wny, seqid 69.2%). |
| 3 | 4wny | - | https://www.sciencedirect.com/science/article/pii/S0065216417300424 | Twenty-Five Years of Investigating the Universal Stress Protein: Function, Structure, and Applications | 2018 | AC Vollmer, SJ Bark- Advances in applied microbiology, 2018 - Elsevier | Since the initial discovery of universal stress protein A (UspA) 25 years ago, remarkable advances in molecular and biochemical technologies have revolutionized our understanding of biology. Many studies using these technologies have focused on characterization of the uspA gene and Usp-type proteins. These studies have identified t... Universal stress protein 4WNY B. pseudomallei Abendroth, Dranow, Lorimer, and Edwards (2008) |
| 4 | 4wxt | - | http://arca.icict.fiocruz.br/handle/icict/12912 | Reposicionamento de frmacos para malriaum mtodo que identifica alvos no domnio das doenas negligenciadas | 2015 | E Barante - 2015 - arca.icict.fiocruz.br | ... the know-how of many technological areas, with focus on information, computing, and, particularlyon the construction and use of existing Internet databases such as MEDLINE, PubMed and PDB. ...The problems appear by the lack of textual structure or appropriate markup tags. ... |
| 5 | 4wxt | - | https://www.sciencedirect.com/science/article/pii/S014181301830610X | Inhibition of thioredoxin A1 from Corynebacterium pseudotuberculosis by polyanions and flavonoids | 2018 | RJ Eberle, LA Kawai, FR de Moraes, D Olivier- International journal of, 2018 - Elsevier | The initial model of the Cp-TrxA1 protein was obtained by homology modeling with the M. avium Trx structure ( PDB : 4WXT ; 50% homology), in order to Structural superposition of the Cp-TrxA1 homology model and the M. avium Trx structure showed a RMSD of 0.188 (Fig |
| 6 | 4wxt | 5uth | https://repositorio.unesp.br/handle/11449/152293 | Mecanismo de ao e infeco por Corynebacterium pseudotuberculosis: expresso, purificao e caracterizao de protenas relacionadas ao metabolismo central | 2017 | LA Kawai - 2017 - repositorio.unesp.br | Page 9. PBS: Tampo fosfato contendo NaCl PDB : Protein Data Bank RMN: Ressonncia Magntica Nuclear Corynebacterium pseudotuberculosis: Role of Electrostatic Forces in the Stability of the Secondary Structure , minha contribuio foi realizada na reviso final, onde |
| 7 | 4x54 | - | https://onlinelibrary.wiley.com/doi/abs/10.1111/mmi.14437 | The mycolic acid reductase Rv2509 has distinct structural motifs and is essential for growth in slowgrowing mycobacteria | 2020 | A Javid, C Cooper, A Singh, S Schindler- Molecular, 2020 - Wiley Online Library | structures of the four highest-scoring experimental SDRs (3ASU/3ASV, 1XG5, 4X54 and 4BMV based on the SDR from Sphingobium yanoikuyae (4BMV. pdb ; GenBank ID ACB78183.1 structure elements of Rv2509 aligned to its corynebacterial homologues, the core structure of |
| 8 | 4xfd | - | https://www.tandfonline.com/doi/abs/10.1080/07391102.2018.1552199 | Validation of NAD synthase inhibitors for inhibiting the cell viability of Leishmania donovani: In silico and in vitro approach | 2019 | H Mandal, S Vijayakumar, S Yadav- Structure and, 2019 - Taylor & Francis | Skip to Main Content |
| 9 | 4xfj | 4oh7 | http://arxiv.org/abs/1601.06764 | FreeSASA: An open source C library for solvent accessible surface area calculation | 2016 | S Mitternacht - arXiv preprint arXiv:1601.06764, 2016 - arxiv.org | ... 88 PDB files were selected randomly from a set of size intervals ... PISCES specifies a specific chainin each structure, but in the following all chains were used, which resulted in the ... 4c1a, 4cj0, 4g6t,4g7x, 4gmu, 4h7u, 4kv7, 4la2, 4lix, 4n13, 4oh7, 4oxx, 4p0t, 4pj2, 4qas, 4xfj, 7odc. ... |
| 10 | 4xfj | - | https://cyberleninka.ru/article/n/spiralnye-parametry-regulyarnyh-spiraley-v-bel... | HELICAL PARAMETERS OF REGULAR π-HELICES IN PROTEINS (Part 2) | 2016 | D. Batkhishig, B. Mijiddorj, P. Enkhbayar, 2016 - cyberleninka.ru | to the DSSP program that is dedicated to identifying n-helices, which were seldom assigned by older versions of DSSP and STRIDE [7]. The secondary structure assignment methods 4XFJ A_68-74 PDB ID Chain_Po sition P (A) n Az (A)b r (A) Vc (A3) P (A) Identified Program |