We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 8ERQ | 2022 | 3 |
| 8ERR | 2022 | 2 |
| 8EWA | 2022 | 0 |
| 8F8U | 2022 | 0 |
| 8FBM | 2023 | 0 |
| 8FI3 | 2022 | 0 |
| 8FI4 | 2022 | 0 |
| 8FI5 | 2022 | 0 |
| 8FI6 | 2022 | 1 |
| 8FT7 | 2023 | 1 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5ihp | - | http://etheses.bham.ac.uk/id/eprint/8469/ | Structural studies of the DNA partitioning protein IncC from the plasmid RK2 | 2018 | MFU Rehman - 2018 - etheses.bham.ac.uk | Page 1. Structural Studies of the DNA Partitioning Protein IncC from the Plasmid RK2 By 251 6.15.2 Crosslink- structure mapping using IncC2 models 23 1.16 Structures of DNA/centromere binding proteins (CBP) 25 1.17 C- and N- terminals of KorB protein |
| 2 | 5j3b | - | https://edoc.ub.uni-muenchen.de/26990/ | The translation elongation factor P in actinobacteria | 2020 | B Pinheiro Damasceno Florentino - 2020 - edoc.ub.uni-muenchen.de | NC Nascent peptide-chain ORF Open reading frame PCR Polymerase chain reaction PDB Protein data EF- P facilitates translation of XPPX motifs is based in many structural studies... Structural superposition and ribbon representations of available EF-P structures. C. glutamicum (PDB code 6S8Z, orange, this work), Acinetobacter baumannii (PDB code: 5J3B, blue), E. coli ( |
| 3 | 5j3b | - | https://www.researchsquare.com/article/rs-51959/latest.pdf | How Signaling Games Explain Mimicry at Many Levels: From Viral Epidemiology to Human Sociology | 2020 | W Casey, S Massey, B Mishra - 2020 - researchsquare.com | Here we will further illustrate and discuss the sur- prisingly diverse dynamics expressed for a variety of population structures The process architecture is simple, but worth noting that each type in the population structure forms a component in the evolution processes ... factor (1EH1), Acinetobacter baumannii elongation factor P (5J3B), T.thermophilus |
| 4 | 5j3b | - | https://www.sciencedirect.com/science/article/pii/S0969212620303737 | Structural Basis for Toxin Inhibition in the VapXD Toxin-Antitoxin System | 2020 | MB Bertelsen, M Senissar, MH Nielsen, F Bisiak- Structure, 2020 - Elsevier | Here, we provide structural insights into the architecture of the intact VapXD TA complex and toxin residues missing in each chain likely due to flexibility (Figure S1A). The structure consists of PDB Entry, VapXD (Selenomethionine) 6ZN8, VapD (Wild Type) 6ZI0, VapD (D7N) 6ZI1... (B) Structure of the Acinetobacter baumannii EF-P OB fold with conserved secondary structure in gold (PDB: 5J3B, left) and corresponding topology (right). |
| 5 | 5j3b | - | https://www.sciencedirect.com/science/article/pii/S2211124720303089 | Structure and Function of an Elongation Factor P Subfamily in Actinobacteria | 2020 | B Pinheiro, CM Scheidler, P Kielkowski, M Schmid- Cell Reports, 2020 - Elsevier | In order to gain insights into the structural configuration of this Actinobacteria EF-P, we X-ray crystal structure to 2.2- resolution (for data processing and structure refinement statistics its overall folding topology with the previously reported bacterial EF-P structures and consists of |
| 6 | 5j49 | - | https://www.sciencedirect.com/science/article/pii/S1570963917302005 | Glucose-1-phosphate uridylyltransferase from Erwinia amylovora: Activity, structure and substrate specificity | 2017 | S Benini, M Toccafondi, M Rejzek, F Musiani- et Biophysica Acta (BBA, 2017 - Elsevier | A summary of data collection and refinement parameters are reported in Table 1. Coordinates and structure factors have been deposited in the PDB with accession code:4D48. A search for structural similarity in the PDB was carried out with PDBeFold [46] Table 4. Glc-1P uridylyltransferase 5J49 B. xenovorans |
| 7 | 5j92 | - | https://sfamjournals.onlinelibrary.wiley.com/doi/abs/10.1111/1462-2920.14847 | Preferential catabolism of the (S)enantiomer of the herbicide napropamide mediated by the enantioselective amidohydrolase SnaH and the dioxygenase Snpd in | 2019 | J Huang, D Chen, J Jiang- Environmental microbiology, 2019 - Wiley Online Library | molecular docking. A homology model of Snpd was built based on chain A of the 5J92 template (sharing 39% identity with Snpd; PDB code; resolution: 1.95 ). A Snpd- KG-FeO complex structure was established in a similar manner as SnaH-Zn-H2O. The |
| 8 | 5ji5 | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8080978.3/ | Identifying potential drug targets and candidate drugs for COVID-19: biological networks and structural modeling approaches | 2021 | G Selvaraj, S Kaliamurthi, GH Peslherbe- F1000Research, 2021 - ncbi.nlm.nih.gov | Structural modeling approach to study host-SARS-CoV-2 proteins interaction and drug and similarity and with the highest resolution template automatically from PDB and then Then, the corresponding structures constructed by superimposing the modeled protein structure on to |
| 9 | 5jry | - | https://www.sciencedirect.com/science/article/pii/S2001037018301545 | Molecular Mechanisms of Bacterial Bioluminescence | 2018 | E Brodl, A Winkler, P Macheroux- Computational and Structural, 2018 - Elsevier | we also show stick models of the substrate analog (indole-3-acetaldehyde – blue) and the cofactor (NADP+ − grey) in the respective binding sites obtained from the superposition of the LuxC model with indole-3-acetaldehyde dehydrogenase from Pseudomonas syringae (PDB 5IUW) and from the structure of an aldehyde dehydrogenase from Burkholderia multivorans (PDB 5JRY), respectively. |
| 10 | 5jy1 | - | https://onlinelibrary.wiley.com/doi/abs/10.1002/adsc.201900144 | Clean Enzymatic Oxidation of 12Hydroxysteroids to 12OxoDerivatives Catalyzed by Hydroxysteroid Dehydrogenase | 2019 | F Tonin, N Alvarenga, JZ Ye- Advanced Synthesis, 2019 - Wiley Online Library | MODEL (https://swissmodel.expasy.org/ interactive), employing the crystal structure of the putative SDR from Burkholderia xenovorans ( PDB ID: 5JY1 .1) as determination of the cosubstrate specificity of these enzymes.[11] The 3D model of the El12-HSDH structure showed a |