We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 8SOY | 2023 | 0 |
| 8SQO | 2023 | 0 |
| 8SQP | 2023 | 0 |
| 8SQQ | 2023 | 0 |
| 8SQR | 2023 | 0 |
| 8SQT | 2023 | 0 |
| 8SU6 | 2023 | 0 |
| 8SWD | 2023 | 0 |
| 8T1A | 2023 | 0 |
| 8T5J | 2023 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 5ucm | - | https://books.google.com/books?hl=en&lr=&id=0-L7DwAAQBAJ&oi=fnd&pg=PA69&dq=%225U... | trans-Editing by aminoacyl-tRNA synthetase-like editing domains | 2020 | ABK Nagy, M Bakhtina- Biology of Aminoacyl, 2020 - books.google.com | bound by an autonomous trans- editing factor, such as C. crescentus ProXp-ala ( PDB ID: 5VXB PheRS is also unique in its oligomeric structure it is a heterote- tramer domain ( bound in an editing active conformation will be needed to fully understand the structural basis for |
| 2 | 5ucm | - | https://www.sciencedirect.com/science/article/pii/S002192581750441X | Human trans-editing enzyme displays tRNA acceptor-stem specificity and relaxed amino acid selectivity | 2020 | O Vargas-Rodriguez, M Bakhtina, D McGowan- Journal of Biological, 2020 - Elsevier | Corrections to the resulting alignment were made based on the structural alignment of Cc ProXp-ala (Protein Data Bank entry 5VXB) and Pa ProRS (Protein Data Bank entry 5UCM). |
| 3 | 5udf | - | https://pubs.acs.org/doi/abs/10.1021/acs.chemrev.1c00055 | Structure, Assembly, and Function of Tripartite Efflux and Type 1 Secretion Systems in Gram-Negative Bacteria | 2021 | I Alav, J Kobylka, MS Kuth, KM Pos, M Picard- Chemical, 2021 - ACS Publications | Journal Logo. Structure , Assembly, and Function of Tripartite Efflux and Type 1 Secretion Systems in Gram-Negative Bacteria. Ilyas Alav Ilyas Alav. Institute of Microbiology and Infection, College of Medical and Dental Sciences |
| 4 | 5udf | - | https://www.pnas.org/content/115/31/E7389.short | Insights into bacterial lipoprotein trafficking from a structure of LolA bound to the LolC periplasmic domain | 2018 | E Kaplan, NP Greene, A Crow- Proceedings of the, 2018 - National Acad Sciences | Fig. 4. Structural and bioinformatic evidence that the Hook is conserved among LolC, LolE, and LolF but absent from the wider type VII ABC transporter superfamily. Comparison of the periplasmic domains of A. actinomycetemcomitans MacB (5LIL), Mycobacterium tuberculosis FtsX (4N8N), E. coli LolC (5NAA), and A. baumannii LolF (5UDF, annotated as LolE in the PDB). |
| 5 | 5udf | - | https://www.nature.com/articles/s41594-021-00573-x | Structural basis for bacterial lipoprotein relocation by the transporter LolCDE | 2021 | X Tang, S Chang, K Zhang, Q Luo, Z Zhang- Nature Structural &, 2021 - nature.com | Advertisement. Advertisement. Nature Structural & Molecular Biology. View all journals; Search; My Account Login. Explore content; Journal information; Publish with us Structural basis for bacterial lipoprotein relocation by the transporter LolCDE |
| 6 | 5udf | - | https://www.sciencedirect.com/science/article/pii/S0959440X17301586 | Translocation of lipoproteins to the surface of gram negative bacteria | 2018 | Y Hooda, TF Moraes- Current opinion in structural biology, 2018 - Elsevier | The model of LolCDE was obtained from the structure of LptBFG ( PDB ID: 5UDF )and is The structure of type IVa pilus machinery from Myxococcus xanthus ( PDB ID: 3JC9) was used as In contrast, Slam possesses a unique domain architecture and no structure of any protein of |
| 7 | 5umf | 3fdz | https://www.frontiersin.org/articles/10.3389/fcimb.2018.00352/full | CSGID Solves Structures and Identifies Phenotypes for Five Enzymes in Toxoplasma gondii | 2018 | E Filippova, AS Halavaty, G Minasov- Frontiers in cellular, 2018 - eprints.whiterose.ac.uk | Crystallography revealed insights into the overall structure , protein oligomeric states and molecular details of active sites important for ligand recognition The targets studied herein were crystallized and their structures characterized, as structural studies have |
| 8 | 5umf | - | https://books.google.com/books?hl=en&lr=&id=XARADwAAQBAJ&oi=fnd&pg=PA97&dq=%225U... | Design of synthetic symmetrical proteins | 2017 | JRH Tameb, ARD Voet- Synthetic Biology: Volume 2, 2017 - books.google.com | assembly, Ribulose-phosphate structure but since exhibits alpha 3-epimerase, C and 2 PDB : 5UMF ) and 12-fold rotational symmetry (cartoon depiction; from left to right, PDB : 4YY2, 4YXX designs will without any doubt improve our understanding of protein structure and stability |
| 9 | 5umh | - | https://pubs.acs.org/doi/abs/10.1021/acs.jcim.0c00802 | Estimating Change in Foldability Due to Multipoint Deletions in Protein Structures | 2020 | A Banerjee, A Kumar, KK Ghosh- Journal of Chemical, 2020 - ACS Publications | Figure S6: Root mean-square fluctuation of each residue of the protein in its original conformation (in magenta) and of the protein subject to MPD in residue stretches in the nonloop region (in sea green) for PDB IDs: 4XGQ chain A, 5UMH chain A, 4A5M chain A, 3GUD chain A, and... |
| 10 | 5umh | 5vxt | https://www.sciencedirect.com/science/article/pii/S0965174818303643 | Structural and functional characterization of an intradiol ring-cleavage dioxygenase from the polyphagous spider mite herbivore Tetranychus urticae Koch | 2018 | CR Schlachter, L Daneshian, J Amaya- Insect biochemistry and, 2018 - Elsevier | Here, we have determined the spectroscopic, structural and metabolic properties of TuIDRCD, the first arthropod ID-RCD used for determination, refinement, and validation of mTuIDRCD structure ; however, in this case the structure of mbp-(t48)TuIDRCD ( PDB code: 5VG2 |