We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5UJU | 2017 | 0 |
| 5UM0 | 2017 | 0 |
| 5UNL | 2017 | 0 |
| 5UXV | 2018 | 0 |
| 5V0R | 2017 | 0 |
| 5V0U | 2017 | 0 |
| 5V77 | 2017 | 0 |
| 5VA8 | 2017 | 0 |
| 5VC2 | 2017 | 0 |
| 5VIX | 2017 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 6nb6 | - | https://www.annualreviews.org/doi/abs/10.1146/annurev-biophys-062920-063711 | Review of COVID-19 antibody therapies | 2021 | J Chen, K Gao, R Wang, DD Nguyen- Annual review of, 2021 - annualreviews.org | S230 SARS-CoV RBD IgG = 0.06 / BLI (73) 6NB6 (73) 4.30 Three-Dimensional Structure Alignment All of the available 3D structures of the SARS-CoV-2 S-protein RBD in complex with antibod- ies are aligned to ACE2 The PDB ID of these complexes can be found in Table 1 |
| 2 | 4k9d | 4l83 | https://benthamopen.com/FULLTEXT/TOBCJ-5-72 | Review on Computational Approaches for Identification of New Targets and Compounds for Fighting Against Filariasis | 2017 | M Mishra, P Srivastava- The Open Bioactive Compounds, 2017 - benthamopen.com | S100a12MMDB ID: 73787 PDB ID: 2WCF [Metal Binding Protein], Glyceraldehyde 3-phosphate dehydrogenase MMDB ID: 109769 PDB ID: 4K9D etc.) in In molecular biology and structural genomics, protein structure determination has become an important area of research |
| 3 | 3gvi | - | http://www.wjpps.com/admin/assets/article_issue/1382162610.pdf | Rhizobitoxine enhances nodulation by inhibiting ethylene synthesis of bradyrhizobium elkanii from lespedeza species: validation by homology modelling and | 2013 | R Vijayan, P Palaniappan, SA Tongmin - World J of pharm and , 2013 - wjpps.com | ... docking studies with the known inhibitor rhizobitoxine. The crystal structure of protein was taken from the Protein Data Bank (entry PDB code: 3GVI). So, we considered the active site residues predicted from the LIGSITE and CASTp has been used for binding with ... |
| 4 | 5vnx | 5jay | https://www.nature.com/articles/s41598-018-32905-1 | Riemerella anatipestifer AS87_RS09170 gene is responsible for biotin synthesis, bacterial morphology and virulence | 2018 | X Ren, X Wang, H Shi, X Zhang, Z Chen, KK Malhi- Scientific reports, 2018 - nature.com | 1DJE [30.2% identity]), Burkholderia multivorans ( PDB accession no. 5VNX [28.6% identity]) and Mycobacterium smegmatis ( PDB accession no. 3WY7 [29.9% identity]) 6). WT Yb2 cells were integral with clear structures , and few were undergoing division |
| 5 | 3jst | - | https://www.sciencedirect.com/science/article/pii/S0141813020335261 | Role of tetrachloro-1, 4-benzoquinone reductase in phenylalanine hydroxylation system and pentachlorophenol degradation in Bacillus cereus AOA-CPS1 | 2020 | OA Aregbesola, A Kumar, MP Mokoena- International Journal of, 2020 - Elsevier | Three-dimensional structure and homology modelling of the protein were predicted by submitting the amino acid sequence at the SWISS-MODEL tool at The modelled PDB files were submitted to an online tool (PDBsum) for determining the structural summary [34]. 2.12 ... and sequence identity of 59%, followed by PCD/DCoH (PDB: 3JST) from Brucella melitensis, |
| 6 | 6xdh | - | https://www.cell.com/structure/pdf/S0969-2126(22)00495-6.pdf | Room-temperature structural studies of SARS-CoV-2 protein NendoU with an X-ray free-electron laser | 2023 | RJ Jernigan, D Logeswaran, D Doppler, N Nagaratnam- Structure, 2023 - cell.com | using the crystal structure of NendoU PDB entry 6XDH as the search model (Dranow et al., unpublished results) with all solvent and ligand atoms removed. The structure was refined |
| 7 | 2kn9 | - | https://www.sciencedirect.com/science/article/pii/S0010854517303119 | Rubredoxins derivatives: Simple sulphur-rich coordination metal sites and its relevance for biology and chemistry | 2017 | BK Maiti, RM Almeida, I Moura, JJG Moura- Coordination Chemistry, 2017 - Elsevier | Rubredoxins (Rds) and their derivatives have been extensively used, in the last few decades, in order to elucidate structure and functional aspects of metal sit. |
| 8 | 4ed9 | - | https://www.sciencedirect.com/science/article/pii/S1570963918301808 | Rv3272 encodes a novel Family III CoA transferase that alters the cell wall lipid profile and protects mycobacteria from acidic and oxidative stress | 2018 | KS Shrimant, S Pandey, A Ansari, S Das- et Biophysica Acta (BBA, 2018 - Elsevier | The structure was found similar to the homologues available including MCR ( PDB ID: 1X74), CaiB ( PDB ID: 1XA3), FRC ( PDB ID: 2VJQ), FRC ( PDB ID: 3UBM), ACOCT ( PDB ID: 4ED9 ), YfdE ( PDB ID: 4HL6 3.5. Solution structure using Small Angle X-ray Scattering (SAXS). |
| 9 | 3d64 | - | http://www.sciencedirect.com/science/article/pii/S0925443912002165 | S-adenosyl-L-homocysteine hydrolase and methylation disorders: Yeast as a model system | 2013 | O Tehlivets, N Malanovic, M Visram… - … et Biophysica Acta (BBA …, 2013 - Elsevier | ... 1. AdoMet — a principal methyl group donor and more. Beyond its role in protein synthesisand structure, methionine, after its activation to AdoMet by methionine adenosyltransferase,plays a crucial role in many aspects of cellular metabolism. ... |
| 10 | 3glq | 3n58 | http://www.sciencedirect.com/science/article/pii/S0141813017311510 | S-adenosyl-L-homocysteine hydrolase from a hyperthermophile (Thermotoga maritima) is expressed in Escherichia coli in inactive formBiochemical and structural | 2017 | K Brzezinski, J Czyrko, J Sliwiak - International Journal of , 2017 - Elsevier | ... tuberculosis [10], Bradyrhizobium elkanii [11], Burkholderia pseudomallei ( PDB entry 3GLQ ; unpublished), Brucella ... Recently, the first crystal structure of SAHase from the hyperthermophilic Thermotoga maritima ... active form has been determined and deposited in the PDB in the ... |