SSGCID
Seattle Structural Genomics Center for Infectious Disease

Cited Structures: list of articles citing SSGCID structures

We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.

This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.

Cited structures

Manually reviewed citations

# PDB Additional SSGCID structures cited Link Title Year Citation Highlighted abstract
1 4fky - http://bbktheses.da.ulcc.ac.uk/81/ The antigenic evolution of human influenza A haemagglutinin 2013 WD Lees - 2013 - bbktheses.da.ulcc.ac.uk ... indicative results much more quickly than laboratory assays; - The use of large bodies ofsequence data in combination with structural information in ... 1.1 Influenza Structure InfluenzaA is an enveloped negative-sense RNA virus (Figure 1.1). It has two surface ...
2 4tu1 3sth http://www.sciencedirect.com/science/article/pii/S1047847715000544 The apicomplexan glideosome and adhesins–Structures and function 2015 LE Boucher, J Bosch - Journal of structural biology, 2015 - Elsevier The apicomplexan family of pathogens, which includes Plasmodium spp. and Toxoplasma gondii,are primarily obligate intracellular parasites and invade multiple c.
3 3pme - http://www.sciencedirect.com/science/article/pii/S096808961000876X The binding of β-d-glucopyranosyl-thiosemicarbazone derivatives to glycogen phosphorylase: A new class of inhibitors 2010 KM Alexacou, AC Tenchiu, ED Chrysina… - Bioorganic & medicinal …, 2010 - Elsevier ... 11. The structural results show that all inhibitors are bound with essentially no disturbance ofthe overall protein structure. ... However, upon binding to the catalytic site compounds 3pBr, 3pCl,3pCF3, 3oOH, 3pOMe and 3pMe trigger a significant shift of the 280s loop with ...
4 3ix6 4whx, 3qat https://journals.asm.org/doi/abs/10.1128/MMBR.00029-16 The blueprint of a minimal cell: MiniBacillus 2016 DR Reu, FM Commichau, J Gundlach- Microbiology and, 2016 - Am Soc Microbiol SUMMARY Bacillus subtilis is one of the best-studied organisms. Due to the broad knowledge and annotation and the well-developed genetic system, this bacterium is an excellent for ... TABLE 2 The complete gene set of MiniBacillus thyB BSU21820 No 2.1.1.45 3IX6 Brucella melitensis
5 2kwl - http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2958.2011.07845.x/full The coenzyme A disulphide reductase of Borrelia burgdorferi is important for rapid growth throughout the enzootic cycle and essential for infection of the mammalian host 2011 CH Eggers, MJ Caimano, RA Malizia? - Molecular Microbiology, 2011 - Wiley Online Library ... The orientation is the same as Fig. 3 published in (Wallen et al., 2008). PDB code for the BaCoADR structure used is 3CGD. B. The predicted active site of BbCoADR. BbCoADR residues [Cys 42 (chain A) and Tyr366' and Tyr424' (chain B)] are indicated. ...
6 4qhq - http://www.degruyter.com/dg/justaccepted.articlelist.resultlinks.fullcontentlink... The contribution of methionine to the stability of the Escherichia coli MetNIQ ABC transporter-substrate binding protein complex. 2015 PT Nguyen, QW Li, NS Kadaba, JY Lai, JG Yang… - Biological …, 2015 - degruyter.com ... structures with PDB entries 3TQW, 3UP9, 4EF1, 4GOT, 4IB2, 4K3F, 4QHQ, 4QYM, and 4Q5T. ...2008) that was in turn solved by molecular replacement from PDB entry 1P99 (Williams et al.,2004), a Gly-Met-binding protein. ... Coordinates and structure factors have been ...
7 4ywj 5bnt, 6bac, 6amy, 5ha4, 6amz, 7skb https://www.sciencedirect.com/science/article/pii/S0304416523000181 The coordinated action of the enzymes in the L-lysine biosynthetic pathway and how to inhibit it for antibiotic targets 2023 S Muduli, S Karmakar, S Mishra- Biochimica et Biophysica Acta (BBA), 2023 - Elsevier (a) The trimeric structure of the CgDapD enzyme ( PDB ID: 5E3P). Two monomers are shown in (b) The crystal structure of the CgDapD enzyme in monomeric form ( PDB ID: 5E3Q),
8 3kw3 - http://www.biomedcentral.com/1471-2180/11/116 The crystal structure of alanine racemase from Streptococcus pneumoniae, a target for structure-based drug design 2011 H Im, ML Sharpe, U Strych, M Davlieva? - BMC Microbiology, 2011 - biomedcentral.com ... of this enzyme from a further six microorganisms have been deposited in the PDB: Bartonella henselae (PDB ID 3KW3), Oenococcus oeni ... are listed in Table 1. Structure factors and final atomic coordinates for AlrSP have been deposited in the Protein Databank (PDB ID: 3S46). ...
9 3emk - http://www.sciencedirect.com/science/article/pii/S0022283611000258 The Crystal Structure of l-Sorbose Reductase from< i> Gluconobacter frateurii</i> Complexed with NADPH and l-Sorbose 2011 K Kubota, K Nagata, M Okai, K Miyazono? - Journal of molecular Biology, 2011 - Elsevier ... Appendix A. ... Strictly conserved residues among the proteins are shown with a red background. Protein names are shown as PDB accession numbers: 2HQ1, glucose/ribitol dehydrogenase from Clostridium thermocellum; 3EMK, glucose/ribitol dehydrogenase from Brucella melitensis; ...
10 4f82 - http://scholar.google.com/https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5022050/ The Crystal Structure of Peroxiredoxin Asp f3 Provides Mechanistic Insight into Oxidative Stress Resistance and Virulence of Aspergillus fumigatus 2016 F Hillmann, K Bagramyan, M Straburger - Scientific , 2016 - ncbi.nlm.nih.gov ... Asp f3's enzymatic activity on peroxides and structural similarity to the previously characterizedyeast-orthologue ... After failing to find a solution using the entire 4F82 model, flexible loops were ...PDB structure identifiers are 5J9B for WT Asp f3 and 5J9C for the C31S/C61S mutant. ...