We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6AP5 | 2017 | 0 |
| 6ANZ | 2017 | 0 |
| 8SQP | 2023 | 0 |
| 8SQO | 2023 | 0 |
| 8SOY | 2023 | 0 |
| 8SNJ | 2023 | 0 |
| 8SNG | 2023 | 0 |
| 8SLH | 2023 | 0 |
| 5VPS | 2017 | 0 |
| 5VO7 | 2017 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3gqt | - | https://onlinelibrary.wiley.com/doi/abs/10.1002/jhet.3617 | Design, Synthesis, and Biological and In Silico Study of FluorineContaining Quinoline Hybrid Thiosemicarbazide Analogues | 2019 | DB Patel, KD Patel, NP Prajapati- Journal of, 2019 - Wiley Online Library | Thus, design, development, and structure modification existing drugs are necessary with highly selective potency on specific strains Entry, Code no. R 1, R 2, R 3, Product, Yield (%)a a Purified yield. 1, 8a, 4CF 3, 6CF 3, ... Figure 4c describes the interaction details of compounds 8d and 8k with PDB: 3GQT; compound 8d showed four H‐bond interactions |
| 2 | 4hvt | 3s6m, 5tnx | https://pubs.acs.org/doi/abs/10.1021/acs.jcim.8b00777 | SPOT-peptide: Template-based prediction of peptide-binding proteins and peptide-binding sites | 2019 | T Litfin, Y Yang, Y Zhou- Journal of chemical information and, 2019 - ACS Publications | test set taken from another structure -based peptide-binding site predictor, SPRINT- peptide11 Structural genomics targets (SG4444) 11,813 proteins involved in structural genomics studies were collected from the PDB plate primarily based on domain-level structural similarity |
| 3 | 4odj | - | https://scripts.iucr.org/cgi-bin/paper?no5145 | Structure of a critical metabolic enzyme: S-adenosylmethionine synthetase from Cryptosporidium parvum | 2019 | J Ohren, GF Parungao, RE Viola- Section F: Structural Biology, 2019 - scripts.iucr.org | Vagin & Teplyakov, 2010) with the structure of C. hominus MetK ( PDB entry 4odj ) as the ordered in the presence of substrates, is disordered and was not modeled in this structure to form functional tetramers with D2 or 222 symmetry, as illustrated by EcoMetK ( PDB entry 1p7l |
| 4 | 4e98 | 4iyq | https://digital.csic.es/handle/10261/178665 | Bases estructurales de la sealizacin y regulacin por nitrgeno y procesos asociados | 2019 | L Tremino-Agull - 2019 - digital.csic.es | Although crystal structures of three bacterial COG0325 proteins ( PDB ) (Supplementary Table S1), none of these structures has been analysed, justifying the need for thorough structural |
| 5 | 6d9y | 6d9n | http://search.ebscohost.com/login.aspx?direct=true&profile=ehost&scope=site&auth... | Protein secondary structure online server predictive evaluation | 2019 | - Chinese Journal of Bioinformatics, 2019 - search.ebscohost.com | 1 SPIDER Fig.1 Main structure of SPIDER 2.1 |
| 6 | 6n38 | - | https://www.frontiersin.org/articles/10.3389/fmicb.2019.01615/abstract | Baseplate component TssK and spatio-temporal assembly of T6SS in Pseudomonas aeruginosa | 2019 | D Liebl, M Robert-Genthon, V Job, V Cogoni- Frontiers in, 2019 - frontiersin.org | TssE is the structural homolog of the T4 phage baseplate components gp25 (Leiman et al To confirm that TssK and TssE assemble into the same spot-like structure we generated and Mekalanos, 2012; Vettiger and Basler, 2016), very low number of TssB- structures were seen... The TssK oligomers disassemble upon action of PppA (shown in dashed lines). Stoichiometry (TssK3)2(TssF2/TssG) in accordance with cryo-EM structure (PDB 6N38) is shown. |
| 7 | 3oj6 | 6cuq, 4o3v | https://www.biorxiv.org/content/10.1101/673897v1.abstract | Combining statistical and neural network approaches to derive energy functions for completely flexible protein backbone design | 2019 | B Huang, Y Xu, H Liu- bioRxiv, 2019 - biorxiv.org | To design a backbone, an intended framework is specified first. This framework defines at a very coarse level the intended backbone architecture , including the numbers For each native structure with the given PDB ID, results of four simulations are plotted in different |
| 8 | 3f9i | - | https://repositories.lib.utexas.edu/handle/2152/74541 | Identifying Novel Inhibitors of RpFabG in Typhus-inducing Rickettsia prowazekii | 2019 | A Panatpur - 2019 - repositories.lib.utexas.edu | The Virtual Cures stream streamlines the aforementioned process by virtually analyzing the structural and chemical bonding relationships a 3-dimensional crystal structure is present for 3-ketoacyl-(acyl-carrier-protein) reductase [ PDB 3F9I ], the available structure has not |
| 9 | 3p96 | - | https://www.mdpi.com/1424-8247/12/2/66 | Targeting the Serine Pathway: A Promising Approach against Tuberculosis? | 2019 | M Haufroid, J Wouters- Pharmaceuticals, 2019 - mdpi.com | Structural differences can occur from one specie to another, ie, human phosphoserine phosphatase is only composed of the PSP domain while of the pathway in order to inhibit the reaction in an allosteric manner (Figure 7b).... Structure of M. avium (3P96) with domain ACT-I in orange, ACT-II in blue, the linker between two ACT domains in red, PSP catalytic domain in grey, linker between PSP domain and ACT-II in green (b). ... |
| 10 | 3ief | 3m4s, 3mqw, 3m1x | https://repositorioinstitucionaluacm.mx/jspui/bitstream/123456789/86/3/Alma%20Ma... | Caracterizacin de la protena TV-PSP1 y su posible participacin en la degradacin del RNAm de tvcp39 en Trichomonas vaginalis | 2019 | AML Villalobos Osnaya - 2019 - repositorioinstitucionaluacm.mx | Tabla 4. Expresin de molculas en presencia y ausencia de Fe2+24 Tabla 5. Cdigos de PDB de protenas cristalizadas de la familia PSP26 structure of Tv-PSP1 with a molecular weight of 40.5 kDa. The secondary structure -- The table actually has an error for the 3ief organism :P |