We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 3R9Q | 2011 | 0 |
| 7STZ | 2022 | 0 |
| 3QYR | 2011 | 0 |
| 7SSR | 2023 | 0 |
| 3PZY | 2011 | 0 |
| 7SSQ | 2023 | 0 |
| 3P2Y | 2010 | 0 |
| 7SL5 | 2022 | 0 |
| 3OA3 | 2010 | 0 |
| 3O0K | 2010 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 6nb8 | - | https://saudijournals.com/media/articles/SIJB_36_143-153.pdf | Drug Targets for Corona Virus (COVID-19): A Systematic Review | 2020 | K Jayakumar - 2020 - saudijournals.com | to neutralize it, and their structures are also available ( PDB IDs: 6NB6, 6NB7, and 6NB8 .The monoclonal antibody, m396, has a competitive role for RBD binding ( PDB ID: 2DD8 However, the structure is highly variable among different members of the CoV family |
| 2 | 4em6 | - | https://www.sciencedirect.com/science/article/pii/S0378874119324778 | Metabolomics coupled with SystemsDock reveal the protective effect and the potential active components of Naozhenning granule against traumatic brain injury | 2020 | J Cao, Y Duan, Y Liu, H Liu, C Wei, J Wang- Journal of, 2020 - Elsevier | Orthogonal projection to latent structure -discriminate analysis (OPLS-DA) was also applied to maximize the Compounds, Docking score(> 6.0), Proportion of protein(%), PDB entry, Source 47.2, 4JYU, 4BBE, 1GJO, 3GJS, 4UI1, 2OOW, 4JC1, 5XSR, 1X9D, 6EYI, 4EM6 , 1TJJ, 2OC2 |
| 3 | 5b8i | - | http://www.plantphysiol.org/content/182/2/1142?utm_source=TrendMD&utm_medium=cpc... | Two SnRK2-interacting calcium sensor isoforms negatively regulate SnRK2 activity by different mechanisms | 2020 | K Tarnowski, M Klimecka, A Ciesielski, G Goch- Plant, 2020 - Am Soc Plant Biol | Skip to main content |
| 4 | 6nb6 | 6nb7 | https://www.nature.com/articles/s41598-020-74715-4 | Molecular docking study of potential phytochemicals and their effects on the complex of SARS-CoV2 spike protein and human ACE2 | 2020 | A Basu, A Sarkar, U Maulik- Scientific reports, 2020 - nature.com | Every coronavirus comprises four structural proteins namely spike, envelope, nucleocapsid and membrane proteins Similarly, PDB ID 6M17 shows the presence of sodium-dependent neutral amino acid transporter B(O)AT1 in its structure |
| 5 | 3v7o | 5dvw | https://www.sciencedirect.com/science/article/pii/S0006291X20303636 | Crystal structure of the Mngl virus VP30 C-terminal domain | 2020 | S Dong, K Wen, H Chu, H Li, Q Yu, C Wang- and Biophysical Research, 2020 - Elsevier | VP30 CTD dimers formed from adjacent crystallographic asymmetric units with those of MARV ( PDB code: 5T3W), RESTV ( PDB code: 3V7O ) and EBOV ( PDB code: 5T3T) In this study, we determined the crystal structure of MLAV VP30 CTD monomer at 1.4 resolution |
| 6 | 4f4f | 3v7n | https://link.springer.com/article/10.1007/s11030-020-10129-8 | Modeling and simulation study to identify threonine synthase as possible drug target in Leishmania major | 2020 | RJ Meshram, KT Bagul, SU Aouti, AM Shirsath- Molecular Diversity, 2020 - Springer | conformational changes. Moreover, we address some important structural and dynamic interactions in the PLP binding region of TS that are in good agreement with previously speculated crystallographic estimations. Additionally |
| 7 | 5i1f | 5j49, 5vct, 5ve7 | https://www.frontiersin.org/articles/10.3389/fmicb.2020.01596/full?report=reader | In vitro and in vivo Evaluation of in silico Predicted Pneumococcal UDPG: PP Inhibitors | 2020 | F Cools, D Triki, N Geerts, P Delputte- Frontiers in, 2020 - frontiersin.org | Currently, the crystal structure of UDPG:PP is only known for several eukaryotes and following bacteria: Helicobacter pylori ( PDB codes 3JUJ and 3JUK) (Kim et al., 2010), E. coli ( PDB code 2E3D) (Thoden and Holden ( PDB codes 5VCT, 5VE7, 5J49, 5I1F ) (Abendroth et al |
| 8 | 4g50 | 3uqb | https://pubs.acs.org/doi/abs/10.1021/acs.jmedchem.0c00911 | Targeting Protein Folding: A Novel Approach for the Treatment of Pathogenic Bacteria | 2020 | NJ Scheuplein, NM Bzdyl, EA Kibble- Journal of Medicinal, 2020 - ACS Publications | Infectious diseases are a major cause of morbidity and mortality worldwide, exacerbated by increasing antibiotic resistance in many bacterial species. The development of drugs with new modes of act... |
| 9 | 6bfu | 6q04, 6nb3, 6q05, 6q07, 6nb4, 6nb7, 6q06 | https://www.biorxiv.org/content/10.1101/2020.07.16.207308v3.abstract | Systematic modeling of SARS-CoV-2 protein structures | 2020 | SI O'Donoghue, A Schafferhans, N Sikta, C Stolte- bioRxiv, 2020 - biorxiv.org | CoV, 82% identity, E = 10-24) with a fold not seen in any other PDB structure (CATH 3.40 from SARS-CoV-2, 98% identity, E = 10-44), all with beta barrel architecture (CATH 2.40 6acg from SARS-CoV, 77% identity, E = 10-321), of which one structure also showed |
| 10 | 4ohc | - | http://bq.facmed.unam.mx/tab/wp-content/uploads/2020/06/9-Gonzalez-Segura.pdf | Orotato fosforribosiltransferasa. Pasado, presente y futuro en el estudio estructural de las protenas. | 2020 | L Gonzlez-Segura, EI Carrizosa-Carbajal - bq.facmed.unam.mx | Past, present and future in the structural study of proteins Key words: Phosphoribosyltransferase; three- dimensional structure ; conformational change; inhibition; pyrimidines synthesis str (PDBs 3M3H y 4RV4), de Burkholderia cenocepacia ( PDB 4OHC ), de Corynebacterium |