We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3gaf | - | https://www.sciencedirect.com/science/article/abs/pii/S2468823123005060 | Design of St-2-2 7α-HSDH mutants for altering substrate preference and thermostability | 2023 | Y Pan, S Tang, L Zhu, D Lou, J Tan, B Wang- Available at SSRN 4429366 - papers.ssrn.com | -helix structure , whereas the 226 C-terminus of EC 7-HSDH and the adjacent loop structure structure analysis stimulated our interest in studying the effect of the C-terminus 229 ... Structural alignments of St-2- 246 2 (slate blue) and crystallized 7α-HSDHs from Escherichia coli (7eny, gray) [41], 247 Clostridium absonum (5epo, salmon red) [22], Brucella Melitensis (3gaf, yellow) [42], |
| 2 | 4y0v | - | https://febs.onlinelibrary.wiley.com/doi/abs/10.1002/1873-3468.14560 | The structure of COPI vesicles and regulation of vesicle turnover | 2023 | RJ Taylor, G Tagiltsev, JAG Briggs- FEBS letters, 2023 - Wiley Online Library | of COPI coat protein structure , we describe how structural and biochemical studies (A) The structure of GDP-bound Arf1 ( PDB 4Y0V ) and GTPbound Arf1 ( PDB 1O3Y). GTP/GDP binding |
| 3 | 6ml8 | - | https://www.nature.com/articles/s42003-023-04793-3 | Structural insights into the broad protection against H1 influenza viruses by a computationally optimized hemagglutinin vaccine | 2023 | JV Dzimianski, J Han, GA Sautto, SM O'Rourke- Communications, 2023 - nature.com | a Closeup of Asn127 of COBRA P1 overlayed with structures of CA/04/09 ( PDB 3LZG) and DV/1/57 bound to the RBS-targeting antibody C05 ( PDB 6ML8 ). b Biolayer interferometry of |
| 4 | 7ral | - | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10769253/ | Broadly neutralizing antibody induction by non-stabilized SARS-CoV-2 Spike mRNA vaccination in nonhuman primates | 2023 | RD Malewana, V Stalls, A May, X Lu, DR Martinez- bioRxiv, 2023 - ncbi.nlm.nih.gov | Our structural studies identified the DH1193 epitope as one of these conserved epitopes on in PDB : 8DPZ, 8DTK, 7RAL . Materials are available with a Materials transfer agreement. |
| 5 | 3lnc | - | https://papers.ssrn.com/sol3/papers.cfm?abstract_id=4631842 | Zno-S. Cerevisiae: An Effective Growth Promoter of Astragalus Memeranaceus and Nano-Antibacterial Agent Against Fusarium Oxysporum by Improving Trifolirhizin | 2023 | Y Su, W Yang, R Wang, H Zhang, J Meng- Available at SSRN - papers.ssrn.com | 3D crystal structures were imported into , PDB ID: 3o7q was selected for MFS transporter, guanylate kinase based 607 on PDB ID: 3lnc , sedoheptulose-bisphosphatase based on PDB |
| 6 | 7m5e | - | https://digital.lib.washington.edu/researchworks/handle/1773/50705 | Development of Automated Methods for Modeling Ligands in Cryo-Electron Microscopy Data | 2023 | A Muenks - 2023 - digital.lib.washington.edu | compared our results to their respective deposited structures and high-resolution crystal crystal structure . For each ligand-protein pair in the EMDB dataset, the PDB was searched for |
| 7 | 3lrf | - | https://www.sciencedirect.com/science/article/pii/S1093326323001638 | Identification of novel compounds against Acinetobacter baumannii 3-oxoacyl-[acyl-carrier-protein] synthase I (FabB) via comprehensive structure-based computational approaches | 2023 | E Albayrak, S Koer, O Mutlu- Journal of Molecular Graphics and Modelling, 2023 - Elsevier | FabB from Vibrio cholerae ( PDB ID: 4XOX ) was selected as a template structure with 57.46% identity for the homology modeling. After modeling, GMQE (Global Model Quality Estimate) ... |
| 8 | 4f2n | - | https://www.nature.com/articles/s41598-023-45448-x | Dual-target drugs against Leishmania donovani for potential novel therapeutics | 2023 | K Bora, M Sarma, SP Kanaujia, VK Dubey- Scientific Reports, 2023 - nature.com | For this study, the crystal structures of Leishmania major FeSODA ( PDB ID: 4F2N ) and ( PDB ID: 2JK6) were obtained from the PDB database 13,14 . The crystal structure of 4F2N was |
| 9 | 3hzg | - | https://www.nature.com/articles/s42003-023-05227-w | Biosynthesis of ansamitocin P-3 incurs stress on the producing strain Actinosynnema pretiosum at multiple targets | 2023 | Q Huang, X Zhang, Z Guo, X Fu, Y Zhao- Communications, 2023 - nature.com | FDTS and dTGD were aligned to 3hzg and 1r66, which form a homo-tetramer and homo- The molecular structure of AP-3 was obtained from the PDB database ( PDB ID: 7e4p). |
| 10 | 7jva | - | https://www.nature.com/articles/s41467-023-35949-8.pdf | Structural basis for a conserved neutralization epitope on the receptor-binding domain of SARS-CoV-2 | 2023 | KYA Huang, X Chen, A Mohapatra- Nature, 2023 - nature.com | PDB code 7M7B for 3D11 and 7JVA for S2A4. c IS-9A and similar antibodies extend their footprints upwards and contact residue 408 and the residues 502-504 region. |