We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 9OBA | 2025 | 0 |
| 9OBC | 2025 | 0 |
| 9OD6 | 2025 | 0 |
| 9P8Z | 2025 | 0 |
| 9PFY | 2025 | 0 |
| 9PG0 | 2025 | 0 |
| 9PG6 | 2025 | 0 |
| 9PGQ | 2025 | 0 |
| 9PL2 | 2025 | 0 |
| 9PMN | 2025 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 7lxy | - | https://www.nature.com/articles/s41467-022-32262-8 | SARS-CoV-2 variants of concern: spike protein mutational analysis and epitope for broad neutralization | 2022 | D Mannar, JW Saville, Z Sun, X Zhu, MM Marti- Nature, 2022 - nature.com | structure , ACE2 affinity, and evasion of antibodies afforded by previously emerged variant spikes, providing a general structural coordinates ( PDB code 7MJG, 7MJM, 7MJN, 7LXY , 7K43 |
| 2 | 7skz | 7sl5 | https://www.research-collection.ethz.ch/entities/publication/05860c88-0378-4184-... | Isolation and Characterization of Broadly Neutralizing Antibodies to Coronaviruses | 2022 | J Jerak - 2022 - research-collection.ethz.ch | -specific structural differences might affect the accessibility of this immunogenic site. Structure (C) Crystal structure of trimeric prefusion stabilized SARS-CoV-2 ( PDB 6VSB 45) with S1 |
| 3 | 2lwk | - | https://portal.ichb.pl/wp-content/uploads/2023/02/Doktorat_AleksandraJarmoowicz.... | Small molecules interacting with Influenza virus RNA and SARS-CoV-2 RNA as potential inhibitors of replication | 2022 | A Jarmoowicz - portal.ichb.pl | M121 structural motif of segment 5 (+)RNA secondary structure was investigated by importance of the conserved secondary structure of mentioned structural motif and suggest that it |
| 4 | 7lxz | 7ly3 | https://www.cell.com/trends/biochemical-sciences/fulltext/S0968-0004(23)00078-6 | Standardizing macromolecular structure files: further efforts are needed | 2023 | N D'Arminio, D Giordano, B Scafuri, A Facchiano- Trends in Biochemical, 2023 - cell.com | We present a brief overview of some of the issues we had to face in this specific case; these issues can probably be generalized to many other structures collected in the PDB database. |
| 5 | 6tz8 | - | https://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1011056 | Natural product ligands of FKBP12: Immunosuppressive antifungal agents FK506, rapamycin, and beyond | 2023 | A Rivera, J Heitman- PLoS pathogens, 2023 - journals.plos.org | adapted from Harnessing calcineurin-FK506-FKBP12 crystal structures from invasive fungal pathogens to develop antifungal agents ( PDB 6TZ8 ) [3]. The original figure was published |
| 6 | 5koi | - | https://www.mdpi.com/2077-0375/13/6/568 | The Alternating Access Mechanism in Mammalian Multidrug Resistance Transporters and Their Bacterial Homologs | 2023 | SA Badiee, UH Isu, E Khodadadi, M Moradi- Membranes, 2023 - mdpi.com | By exploring the structural and functional features of PDB files for each protein by resolution, starting with higher-resolution structures and progressing to lower-resolution structures Table 1. Available PDB files for MRP1, Pgp, Sav1866, and MsbA transporter proteins. ... 5KOI [59] 3.85 Å X-ray |
| 7 | 6mc0 | - | https://papers.ssrn.com/sol3/papers.cfm?abstract_id=4655406 | Synthesis and Kinetic Evaluation of Phosphomimetic Inhibitors Targeting Type B Ribose-5-Phosphate Isomerase from Mycobacterium Tuberculosis | 2023 | S Courtiol-Legourd, S Mariano, J Foret- Mycobacterium - papers.ssrn.com | of SoRpiA has not yet been presented, but that of the chloroplastic enzyme ( PDB code 6ZXT) [ An RpiA structure with R5P/Ru5P bound and with excellent resolution is 6MC0 (Legionella |
| 8 | 4f2n | - | https://www.nature.com/articles/s41598-023-45448-x | Dual-target drugs against Leishmania donovani for potential novel therapeutics | 2023 | K Bora, M Sarma, SP Kanaujia, VK Dubey- Scientific Reports, 2023 - nature.com | For this study, the crystal structures of Leishmania major FeSODA ( PDB ID: 4F2N ) and ( PDB ID: 2JK6) were obtained from the PDB database 13,14 . The crystal structure of 4F2N was |
| 9 | 3k9g | 3s6l, 3oib, 3km3, 3njb, 3o2e | https://scripts.iucr.org/cgi-bin/paper?nz5010 | Multivariate estimation of substructure amplitudes for a single-wavelength anomalous diffraction experiment | 2023 | NS Pannu, P Skubk- Acta Crystallographica Section D: Structural, 2023 - scripts.iucr.org | The model-building performance is judged by the fraction of the PDB -deposited model backbone that is `correctly built'. A residue is considered to be correctly built if its C position is at |
| 10 | 5vwm | 6ote, 6pth, 6cfp | https://papers.ssrn.com/sol3/papers.cfm?abstract_id=4633401 | Unveiling Success Determinants for Amb-Assisted Phase Expansion of Fusion Proteins in Arp/Warp | 2023 | MC Cardona-Echavarra, C Santilln - papers.ssrn.com | In this study, the PDB was mined to obtain an up-to-date list of the FP crystallographic 103 structures of the most used protein tags: maltose binding protein (MBP), thioredoxin (TRX), |