SSGCID
Seattle Structural Genomics Center for Infectious Disease

Cited Structures: list of articles citing SSGCID structures

We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.

This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.

Cited structures

Manually reviewed citations

# PDB Additional SSGCID structures cited Link Title Year Citation Highlighted abstract
1 3r8c 4em8, 3te8 http://repositories.lib.utexas.edu/handle/2152/24852 Scoring functions for protein docking and drug design 2014 S Viswanath - 2014 - repositories.lib.utexas.edu ... are also found in cell membranes, which is a hydrophobic (non-polar and water-repelling) environment. Figure 1.1 shows two complexes in the Protein Data Bank (PDB)[6, 7]. Figure 1.1 (a) is a structure of soluble complex (PDB ID 3hct) [6], which is a structure of ...
2 5eo6 - http://search.proquest.com/openview/8ed519e66d770fcd1d89f1dbb2d646ac/1?pq-origsi... A Molecular, Structural, and Cellular Multiple-Level Study Aimed at Understanding the Unique Reaction Catalyzed by the Last Enzyme in the Heme-Biosynthesis 2018 AIC Luna - 2018 - search.proquest.com Overlay of the structures of a representative heme b-bound chlorite dismutase and solvent This research aimed to understand ChdC function at the molecular, structural , and cellular levels The coproheme-bound ChdC structure revealed a helical-loop that is flexible and moves
3 3ujh - http://dx.plos.org/10.1371/journal.pone.0125831 Evidence for Positive Selection within the PgiC1 Locus in the Grass Festuca ovina 2015 Y Li, B Canbäck, T Johansson, A Tunlid, HC Prentice - 2015 - dx.plos.org ... 0.45 Å root-mean-square deviations for the backbone atoms from the template Toxoplasma 3ujh.pdb structure. ... of the candidate sites in the homology-modeled PGIC1 3-D structure, it can ...For comparative purposes, the 3-D protein structural locations of the PGI amino acid sites ...
4 3oa1 - https://148.204.103.62/handle/123456789/24905 Modelado molecular de la fosfoprotena del virus de la rabia 2018 EM Dvila Gonzlez - 2018 - 148.204.103.62 De los servidores de NCBI y PDB se obtuvo la secuencia consenso, as como los templetes del alineamiento del monomero del virus de la rabia (azul) con el cristal 3OA1 (amarillo AAV Albertini, GS, W Weissenborn, RWH Ruigrok, Structural Aspect of Rabies Virus Replication
5 4f2n 4f40 https://www.recima21.com.br/index.php/recima21/article/view/148 DOCKING MOLECULAR E AVALIAO DA ATIVIDADE ANTILEISHMANIA IN VITRO DE UM COMPLEXO METLICO DE RUTNIO COM EPIISOPILOTURINA E 2021 J Arajo- -Revista Cientfica Multidisciplinar-ISSN 2675-6218, 2021 - recima21.com.br The 3D protein structures of L. major targets were obtained from the Protein Data Bank ( PDB ) database with codes 1e7w (Pteridine reductase), 5nzg (UDP-glucose Pyrophosphorylase), 5g20 (Glycyl Peptide N-tetradecanoyltransferase), 5c7p Enzimas Identificao PDB 4F2N
6 4eqy - http://scholarcommons.usf.edu/etd/5614/ Computer-Aided Structure-Based Drug Discovery: CXCL12, P. aeruginosa LpxA, and the Tiam1 PDZ Domain 2014 EW Smith - 2014 - scholarcommons.usf.edu ... there seems to be some noticeable variation at the C-terminal end of the third α-helix, involving dissimilar tilts compared to bacterial orthologs A. baumannii (PDB ID: 4E6U), L. interrogans (PDB ID: 3HSQ), C. jejuni (PDB ID: 3ROS), B. thailandensis (PDB ID: 4EQY),...
7 4o2d - http://scripts.iucr.org/cgi-bin/paper?nw5044 Crystal structure of the N-terminal anticodon-binding domain of the nondiscriminating aspartyl-tRNA synthetase from Helicobacter pylori 2017 C Songsiriritthigul, S Suebka, CJ Chen - Section F: Structural , 2017 - scripts.iucr.org ... 4a), similar to the positions of the Pro82 residue in the S. tokodaii ND- AspRS structure (Sato etal., 2007). ... Structural comparison of ND-AspRS1104 from H. pylori with those from M. smegmatis(PDB entry 4o2d; Baugh et al., 2015) and P. aeruginosa (PDB entry 4wj4 ...
8 6tz8 - https://www.currentscience.ac.in/data/forthcoming/206.pdf Uneditedversion published onlineon 15/7/2021 2021 G Biswas, R Banerjee - currentscience.ac.in exclusively with P2, while P1 mediates molecular recognition and binding, as evident from the crystal structures of (truncated) SurA-peptide complexes46 The crystal structure of CaEss1 showed structural similarity to the human PIN1 protein except for the
9 4emd 4ed4, 4dxl http://commons.lib.niu.edu/handle/10843/21449 Evaluation of IspE for inhibitor design in the non-mevalonate pathway 2018 KB Hoerchler - 2018 - commons.lib.niu.edu crystal structures were obtained ( PDB : 1UEK, 1OJ4).38,39 IspE possesses structural features Figure 1-5. Crystal Structures of MaIspE The left structure ( PDB : 4EMD ) co-crystallized with CMP and a sulfate ion while the right ( PDB : 4ED4) co-crystallized with ATP.42
10 4q12 4pzu http://pubs.acs.org/doi/abs/10.1021/acs.biochem.7b00506 Biochemical Investigation of Rv3404c from Mycobacterium tuberculosis 2017 MM Dunsirn, JB Thoden, M Gilbert, HM Holden - Biochemistry, 2017 - ACS Publications ... and 4Q12). Whereas this protein was suggested to be a sugar N-formyltransferase, ... RelevantX-ray data collection statistics are listed in Table 1. The structure was solved via molecularreplacement with PHASER21 and using PDB entry 4PZU as a search probe. ...