SSGCID
Seattle Structural Genomics Center for Infectious Disease

SSGCID models

Structures predicted by homology modelling with Robetta or modelled de-novo with evolutionary constraints using GREMLIN and Rosetta.

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Results: 547

Model Method Target Status Annotation Organism Community
IPD_15652 comparative modelling BewuA.18655.a in PDB Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15657 comparative modelling BewuA.20418.a selected ORF7a Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15661 comparative modelling BewuA.18928.a selected orf1ab polyprotein nsp1 Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15666 comparative modelling BewuA.18928.a purified orf1ab polyprotein nsp7 Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15667 comparative modelling BewuA.18928.a purified orf1ab polyprotein nsp8 Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15668 comparative modelling BewuA.18928.a purified orf1ab polyprotein nsp9 Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15669 comparative modelling BewuA.18928.a purified orf1ab polyprotein nsp10 Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15670 comparative modelling BewuA.18928.a cloned orf1ab polyprotein RdRp (RNA-directed RNA polymerase) (nsp12) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15671 comparative modelling BewuA.18928.a purified orf1ab polyprotein ExoN (Guanine-N7 methyltransferase) (nsp14) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15672 comparative modelling BewuA.18928.a in PDB orf1ab polyprotein NendoU (Uridylate-specific endoribonuclease) (nsp15) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15673 comparative modelling BewuA.18928.a purified orf1ab polyprotein nsp16 (2prime-O-methyltransferase) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15727 comparative modelling BewuA.18651.a purified Nucleoprotein (N) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15732 comparative modelling BewuA.18928.a target approved orf1ab polyprotein PL-PRO (Papain-like proteinase) (nsp3) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_15733 comparative modelling BewuA.18928.a selected orf1ab polyprotein nsp4 Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest
IPD_3032 comparative modelling MygeA.20072.a purified Single-stranded DNA-binding protein SSB (MG_091) Mycoplasma genitalium interest
IPD_81172 comparative modelling MygeA.00023.a target approved Inorganic pyrophosphatase (MG_351) Mycoplasma genitalium interest
IPD_81173 comparative modelling MygeA.00029.a target approved Thioredoxin (MG_124) Mycoplasma genitalium interest
IPD_81174 comparative modelling MygeA.00163.a expressed Phenylalanine--tRNA ligase alpha subunit (MG_194) Mycoplasma genitalium interest
IPD_81175 comparative modelling MygeA.00169.a selected Replicative DNA helicase (MG_094) Mycoplasma genitalium interest
IPD_81176 comparative modelling MygeA.00345.a cloned Fructose-bisphosphate aldolase (MG_023) Mycoplasma genitalium interest
IPD_81177 comparative modelling MygeA.00430.a soluble Tryptophan--tRNA ligase (MG_126) Mycoplasma genitalium interest
IPD_81178 comparative modelling MygeA.00612.a cloned Lysine--tRNA ligase (MG_136) Mycoplasma genitalium interest
IPD_81179 comparative modelling MygeA.00866.a target approved GTPase Obg (MG_384) Mycoplasma genitalium interest
IPD_81180 comparative modelling MygeA.00914.a in PDB Glyceraldehyde-3-phosphate dehydrogenase (MG_301) Mycoplasma genitalium interest
IPD_81181 comparative modelling MygeA.00966.a in PDB Probable ribose-5-phosphate isomerase B (MG_396) Mycoplasma genitalium interest