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SSGCID
Seattle Structural Genomics Center for Infectious Disease

SSGCID structures

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Structure PDB Target Annotation Organism Community Deposited Structure type Ligands
thumbnail of PDB structure 9DB0 9DB0 AlfeA.18655.a Spike glycoprotein Alphacoronavirus Feline infectious peritonitis virus internal 08/23/2024 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy...;alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-..;palmitoleic acid (PAM);
no image available 9DB3 AlfeA.18655.a Spike glycoprotein Alphacoronavirus Feline infectious peritonitis virus internal — CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy...;alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-..;palmitoleic acid (PAM);
no image available 9DBZ AlfeA.18655.a Spike glycoprotein Alphacoronavirus Feline infectious peritonitis virus internal — CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy...;alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-..;palmitoleic acid (PAM);
thumbnail of PDB structure 7JVC 7JVC BewuA.18655.a Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest 08/20/2020 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy...;
thumbnail of PDB structure 7JW0 7JW0 BewuA.18655.a Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest 08/24/2020 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy...;
thumbnail of PDB structure 7LY2 7LY2 BewuA.18655.a Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest 03/05/2021 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy...;
no image available 7USA AlcaA.18655.a Spike glycoprotein Alphacoronavirus Canine coronavirus internal — CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy...;
no image available 8VYF BewuV.18655.a Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 internal — CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy...;
thumbnail of PDB structure 9C44 9C44 BewuA.18655.a Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest 06/03/2024 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy...;
thumbnail of PDB structure 9C45 9C45 BewuA.18655.a Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest 06/03/2024 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy...;
thumbnail of PDB structure 9DGO 9DGO BecoC.18655.a S protein Betacoronavirus MERS-related coronavirus interest 09/03/2024 XRay NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy...;
thumbnail of PDB structure 7US6 7US6 AlcaA.18655.a Spike glycoprotein Alphacoronavirus Canine coronavirus internal 04/23/2022 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-..;
thumbnail of PDB structure 7K43 7K43 BewuA.18655.a Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest 09/14/2020 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido...;
thumbnail of PDB structure 7N8H 7N8H BewuA.18655.a Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest 06/14/2021 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido...;
thumbnail of PDB structure 9DB1 9DB1 AlfeA.18655.a Spike glycoprotein Alphacoronavirus Feline infectious peritonitis virus internal 08/23/2024 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido...;
thumbnail of PDB structure 9DBE 9DBE AlfeA.18655.a Spike glycoprotein Alphacoronavirus Feline infectious peritonitis virus internal 08/23/2024 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido...;
thumbnail of PDB structure 7K4N 7K4N BewuA.18655.a Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest 09/15/2020 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;
thumbnail of PDB structure 7JZL 7JZL BewuA.18655.a Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest 09/02/2020 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;
thumbnail of PDB structure 7JZN 7JZN BewuA.18655.a Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest 09/02/2020 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;
thumbnail of PDB structure 7JV6 7JV6 BewuA.18655.a Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest 08/20/2020 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;
thumbnail of PDB structure 7JV4 7JV4 BewuA.18655.a Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest 08/20/2020 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;
thumbnail of PDB structure 7KNA 7KNA InvbG.18715.a Hemagglutinin (HA) Influenzavirus A Influenza A virus request 11/04/2020 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;
thumbnail of PDB structure 7RA8 7RA8 BewuA.18655.a Spike glycoprotein (S) Betacoronavirus SARS-CoV-2 (2019-nCoV) (COVID-19) interest 06/30/2021 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;
thumbnail of PDB structure 7SOA 7SOA BewuL.18655.a Spike glycoprotein Betacoronavirus SARS-CoV-2 internal 10/29/2021 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;
thumbnail of PDB structure 7SOD 7SOD BewuR.18655.a Spike glycoprotein Betacoronavirus SARS-CoV-2 internal 10/29/2021 CryoEM NAG;2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose;