We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 3D64 | 2008 | 14 |
| 4F2N | 2012 | 14 |
| 3CEZ | 2008 | 13 |
| 4GIE | 2012 | 13 |
| 4O3V | 2014 | 13 |
| 3FVB | 2009 | 13 |
| 3MEN | 2010 | 13 |
| 7RA8 | 2021 | 13 |
| 7JV6 | 2021 | 13 |
| 3DAH | 2008 | 13 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3men | - | http://pubs.acs.org/doi/abs/10.1021/bi101859k | Structure of Prokaryotic Polyamine Deacetylase Reveals Evolutionary Functional Relationships with Eukaryotic Histone Deacetylases | 2011 | PM Lombardi, HD Angell, DA Whittington, EF Flynn? - Biochemistry, 2011 - ACS Publications | The recently solved X-ray crystal structure of the Burkholderia pseudomallei APAH dimer (PDB ID: 3MEN; 34% sequence identity with M. ramosa APAH) contains a 16-residue L2 loop insertion (A79−R101) between helices B2 and B3. |
| 2 | 3fs2 | 3ez4, 3ijp | http://www.tandfonline.com/doi/full/10.3109/10611861003649753 | Targeting multiple targets in Pseudomonas aeruginosa PAO1 using flux balance analysis of a reconstructed genome-scale metabolic network | 2011 | D Perumal, A Samal, KR Sakharkar… - Journal of drug …, 2011 - Taylor & Francis | ... 3D structural information of target protein–ligand molecular complexes is a very usefulmethod to identify high-quality drug targets. ... A search against Protein Data Bank (PDB)helped us shortlist targets that had structure available. ... |
| 3 | 3oec | - | http://www.jbc.org/content/286/42/37011.short | Biochemical Studies and Ligand-bound Structures of Biphenyl Dehydrogenase from Pandoraea pnomenusa Strain B-356 Reveal a Basis for Broad Specificity of the Enzyme | 2011 | S Dhindwal, DN Patil, M Mohammadi? - Journal of Biological Chemistry, 2011 - ASBMB | ... PDB code 1BDB and BphB B-356 are shown in black color, and other structures are shown in light colors. These PDB codes are: 2HQ1, 3OEC, 3PKO, 2UVD, 2PNF, 2WSB, 1YDE, 2WDZ, 1HDC, and 1NFR. Reactivity of BphB B-356 with Polychlorinated Biphenyls. ... |
| 4 | 3qdf | - | http://scripts.iucr.org/cgi-bin/paper?hc5132 | Expression, purification, crystallization and preliminary crystallographic analysis of Cg1458: a novel oxaloacetate decarboxylase from Corynebacterium glutamicum | 2011 | T Ran, Y Wang, D Xu, W Wang - Acta Crystallographica Section F Structural Biology and Crystallization Communications, 2011 - scripts.iucr.org | ... was collected at 1.9 ? resolution using synchrotron radiation on beamline BL17U of SSRF, Shanghai, China. Structure-solution attempts by molecular replacement were successful with PDB entries 3qdf or 2dfu as the template. ... |
| 5 | 3q8n | - | http://search.ebscohost.com/login.aspx?direct=true&profile=ehost&scope=site&auth... | MODELING AND DOCKING STUDIES OF 4-AMINOBUTYRATE AMINOTRANSFERASE FOR HUNTINGTON'S DISEASE. | 2011 | H Pareek, P Thakur, D Ray - International Journal of Pharma & Bio Sciences, 2011 - search.ebscohost.com | ... desired protein ie GABA-AT using a template sequence with PDB code 3Q8N. The constructed 3D models were checked for DOPE score and Ramachandran plot respectively with Modeller 9v8 and PROCHECK. Results are shown in Table 1. Model No. ... |
| 6 | 3dmo | - | http://permalink.lanl.gov/object/tr?what=info:lanl-repo/lareport/LA-UR-11-04078 | Achievements of structural genomics | 2011 | TC Terwilliger - 2011 - permalink.lanl.gov | ... Semi-automated Structure determination ~ ... PDB 3BV6, 2275 AA Metallo protein - ... l University ofIowa 2 University of Michigan Medical School Crystal structures of the FDTS-FAD- 3The JointCenter for Structural Genomics at GNF 4SSRL, Stanford University dUMP complex. ... |
| 7 | 3iml | 3n58 | http://mbio.asm.org/content/2/3/e00051-11.short | Identification and Characterization of the Chlamydia trachomatis L2 S-Adenosylmethionine Transporter | 2011 | R Binet, RE Fernandez, DJ Fisher, AT Maurelli - mBio, 2011 - Am Soc Microbiol | ... The alignment was generated using the Tcoffee expresso Web server using Arabidopsis thaliana MAT1 sequence (P23686) and the tertiary sequence of rat MAT1 (PDB ID 1O9T), E. coli MAT (PDB ID 1XRC) and Burkholderia pseudomallei MAT (PDB ID 3IML). ... |
| 8 | 3cez | - | http://onlinelibrary.wiley.com/doi/10.1002/prot.23141/full | Structural and biochemical analysis of mammalian methionine sulfoxide reductase B2 | 2011 | FL Aachmann, GH Kwak, R Del Conte? - Proteins: Structure, Function, and Bioinformatics, 2011 - Wiley Online Library | ... coordinate files of the minimized MsrB2 family are deposited in the Protein Data Bank (PDB) under accession ... pneumoniae (3e0o),49Neisseria meningitidis (3hcg),46Methanothermobacter thermautotrophicus (2k8d), Burkholderia pseudomallei (3cez), Neisseria gonorrhoeae ... |
| 9 | 3la9 | - | http://www.springerlink.com/index/M46X0Q11002X8755.pdf | Structure and biology of trimeric autotransporter adhesins | 2011 | A ?yskowski, JC Leo, A Goldman - Bacterial Adhesion, 2011 - Springer | ... The structures are identified by their PDB ID codes where avail- able. ... structure of Haemophilus HiaDB2; (c) 3emi: structure of Haemophilus Hia 307?442 non-adhesive domain; (d) 3emo: structure of transmembrane domain of Haemophilus Hia 973?1098; (e) 3la9: structure of ... |
| 10 | 3o0m | - | http://www.sciencedirect.com/science/article/pii/S002228361100492X | Structural Insights into the Novel Diadenosine 5′,5‴-P1,P4-Tetraphosphate Phosphorylase from Mycobacterium tuberculosis H37Rv | 2011 | S Mori, K Shibayama, JI Wachino, Y Arakawa - Journal of Molecular Biology, 2011 - Elsevier | ... Homo sapiens fragile HIT protein [Fhit; Protein Data Bank (PDB) IDs: 6FIT and 1FHI; Z-score = 16.1 and 15.8, respectively], which is a HIT family Ap n A hydrolase; [11] and [12] Zn-bound HIT family protein from Mycobacterium smegmatis (MSMEG5028; PDB ID: 3O0M; Z-score ... |