We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 5TF4 | 2016 | 0 |
| 3N7T | 2010 | 0 |
| 6CY5 | 2018 | 0 |
| 6CXM | 2018 | 0 |
| 5TEW | 2016 | 0 |
| 7K46 | 2020 | 0 |
| 7K47 | 2020 | 0 |
| 3MXU | 2010 | 0 |
| 7K5Z | 2020 | 0 |
| 4XGN | 2015 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 4dhk | 3km3 | http://oaktrust.library.tamu.edu/handle/1969.1/152538 | Functional Exploration and Characterization of the Deaminases of Cog0402 | 2014 | DS Hitchcock - 2014 - oaktrust.library.tamu.edu | ... Page 29. 18 4DHK). The catalytic machinery for both of these reactions remains intact. Substrate ...centered around residues aligning to the catalytic Glu138. However the structure shows 370AAs, whereas E. coli dCTP deaminase (PDB: 1XS1) is only 193 residues. A full ... |
| 2 | 4iv5 | - | http://www.mdpi.com/1422-0067/16/8/18836/pdf | From Genome to Structure and Back Again: A Family Portrait of the Transcarbamylases | 2015 | D Shi, NM Allewell, M Tuchman - International Journal of Molecular …, 2015 - mdpi.com | ... dodecameric holoenzyme with DHOase, were determined [50,51]. Only one eukaryotic ATCasestructure, of Trypanosoma cruzi, has been determined (PDB code: 4IV5). ... Both domains havean αβα structure with a parallel β-sheet in the center and α helices on both sides. ... |
| 3 | 4giv | - | https://open.library.ubc.ca/collections/ubctheses/24/items/1.0340574 | Investigating the molecular architecture of yeast histone acetyltransferase complexes | 2016 | D Setiaputra - 2016 - open.library.ubc.ca | Learning, knowledge, research, insight: welcome to the world of UBC Library, the second-largest academic research library in Canada. |
| 4 | 3qi6 | - | http://onlinelibrary.wiley.com/doi/10.1002/pro.3158/full | Structural and mechanistic insights into homocysteine degradation by a mutant of methionine lyase based on substrateassisted catalysis | 2017 | D Sato, T Shiba, S Yunoto, K Furutani - Protein , 2017 - Wiley Online Library | ... Cys116 remains connected to the 2*/3* loop to form the active center. We previouslydemonstrated that the crystal structure of PpMGL is a ... 1e5f, 3acz and 5dx5), cystathionine-synthases (PDB: 1cs1 and 3qi6) and cystathionine -lyases (PDB: 1n8p and 2nmp). ... |
| 5 | 3qi6 | 3qhx | http://scripts.iucr.org/cgi-bin/paper?nw5049 | The hyperthermophilic cystathionine -synthase from the aerobic crenarchaeon Sulfolobus tokodaii: expression, purification, crystallization and structural insights | 2017 | D Sato, T Shiba, S Mizuno, A Kawamura - Section F: Structural , 2017 - scripts.iucr.org | ... E. Ahmed & S. Gourinath, unpublished work) and Mycobacterium ulcerans Agy99 (PDB entries 3qi6 and 3qhx ... of StCGS was solved by molecular replacement using E. coli CGS (PDB entry 1cs1 ...at basic pH and elevated temperature is caused by changes in the protein structure. ... |
| 6 | 3ix6 | 4whx, 3qat | https://journals.asm.org/doi/abs/10.1128/MMBR.00029-16 | The blueprint of a minimal cell: MiniBacillus | 2016 | DR Reu, FM Commichau, J Gundlach- Microbiology and, 2016 - Am Soc Microbiol | SUMMARY Bacillus subtilis is one of the best-studied organisms. Due to the broad knowledge and annotation and the well-developed genetic system, this bacterium is an excellent for ... TABLE 2 The complete gene set of MiniBacillus thyB BSU21820 No 2.1.1.45 3IX6 Brucella melitensis |
| 7 | 6ws6 | - | https://www.science.org/doi/abs/10.1126/scitranslmed.abj7125 | A broadly cross-reactive antibody neutralizes and protects against sarbecovirus challenge in mice | 2021 | DR Martinez, A Schfer, S Gobeil, D Li- Science translational, 2021 - science.org | Binding and structural analysis showed high affinity binding of DH1047 to an epitope that is ACE2 (yellow surface representation, PDB 6VW1) binding to RBD is sterically hindered by |
| 8 | 3fvb | 4di0 | https://tspace.library.utoronto.ca/handle/1807/69450 | Understanding the Encapsulins | 2015 | D Radford - 2015 - tspace.library.utoronto.ca | ....The Dps-like bacterioferritin-like family was defined as the set of proteins similar to the Brucella melitensis biovar Abortus 2308 bacterioferritin [PDB accession: 3FVB] .. Lastly the rubrerythrin-like family was defined as the set of proteins similar to the Burkholderia pseudomallei rubrerythrin [PDB accession: 4DI0], and N-terminal domains of the Ferroglobus placidus DSM 10642 encapsulin ... |
| 9 | 3fs2 | 3ez4, 3ijp | http://www.tandfonline.com/doi/full/10.3109/10611861003649753 | Targeting multiple targets in Pseudomonas aeruginosa PAO1 using flux balance analysis of a reconstructed genome-scale metabolic network | 2011 | D Perumal, A Samal, KR Sakharkar… - Journal of drug …, 2011 - Taylor & Francis | ... 3D structural information of target protein–ligand molecular complexes is a very usefulmethod to identify high-quality drug targets. ... A search against Protein Data Bank (PDB)helped us shortlist targets that had structure available. ... |
| 10 | 6q04 | - | https://www.sciencedirect.com/science/article/pii/S1047847721000186 | Spike protein fusion loop controls SARS-CoV-2 fusogenicity and infectivity | 2021 | D Pal- Journal of Structural Biology, 2021 - Elsevier | The structural and dynamics analyses of the Spike show that its fusion loop spatially organizes three fusion peptides contiguous to each other to synergistically I propose a Contact Initiation Model based on the architecture of the Spike quaternary structure that explains the |