We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6Q1Y | 2019 | 0 |
| 6TYJ | 2020 | 0 |
| 7TJ3 | 2022 | 0 |
| 6UCZ | 2019 | 0 |
| 6UDE | 2019 | 0 |
| 7TI7 | 2022 | 0 |
| 6UDG | 2019 | 0 |
| 6UH2 | 2019 | 0 |
| 6UHW | 2019 | 0 |
| 6UJD | 2019 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 6cum | - | https://onlinelibrary.wiley.com/doi/abs/10.1107/S2059798321004368 | Introduction to molecular replacement: a time perspective | 2021 | E Dodson- Acta Crystallographica Section D: Structural, 2021 - Wiley Online Library | the phase error between the correct value and the phases generated from the best solution; Dphi_DM, the phase error after density modification, which was performed with Parrot, except for PDB entry 6cum , which used Rebuilt?, Yes if the test structure could be rebuilt |
| 2 | 3r2v | - | https://www.sciencedirect.com/science/article/pii/B9780323857307000266 | Antimicrobial (viral, bacterial, fungal, and parasitic) mechanisms of action of boron-containing compounds | 2023 | ED Farfn-Garca, A Kilic, J Garca-Machorro- Viral, Parasitic, Bacterial, 2023 - Elsevier | in a complex on the polymerase basic protein 2 of the influenza virus ( PDB code: 3R2V ). in the Protein Data Bank ( PDB ). The obtained crystal structures allow the analysis of BCC with |
| 3 | 3tl6 | - | https://link.springer.com/chapter/10.1007/978-3-319-23497-7_13 | Basic Exploratory Proteins Analysis with Statistical Methods Applied on Structural Features | 2015 | E Del Prete, S Dotolo, A Marabotti- Mathematical Models in, 2015 - Springer | 1JP7, 1M73, 1ODK, 1PK9, 1QE5, 1TCU, 1V4N, 1VMK, 1XE3, 1Z33, 2P4S, 3KHS, 3OZE, 3SCZ, 3TL6 , 3UAV, 4D98 2. Different online and local tools have been used to extract protein structural properties from PDB files: Vadar [15], for secondary structure (also confirmed |
| 4 | 3tl6 | - | http://link.springer.com/chapter/10.1007/978-3-319-24462-4_3 | Statistical Analysis of Protein Structural Features: Relationships and PCA Grouping | 2014 | E Del Prete, S Dotolo, A Marabotti - Intelligence Methods for , 2014 - Springer | ... 1ODK, 1PK9, 1QE5, 1TCU, 1V4N, 1VMK, 1XE3, 1Z33, 2P4S, 3KHS, 3OZE, 3SCZ, 3TL6, 3UAV,4D98 ... The legend of the right refers to PDB codes (see Table 1) with the addition ... to con- sidersome structural features as putative markers of the peculiar structure-function properties ... |
| 5 | 3l56 | 3khw, 3r2v | https://tel.archives-ouvertes.fr/tel-01485269/ | Dynamique structurale et fonctionnelle du domaine C-terminal de la protine PB2 du virus de la grippe A | 2015 | E Delaforge - 2015 - tel.archives-ouvertes.fr | ...Superposition des structures du 627-NLS de différentes souches sur 2VY6 en gris. A/little yellow-shouldered bat/Guatemala/060/2010 (H17N10) PDB 4WSB (vert), A/mexico/indre4487/2009 (H1N1) PDB 3KHW (orange), A/vietnam/1203/2004 (H5N1) PDB 3L56 (rose), A/Yokohama/2017/03 PDB 3R2V (H3N2) (bleu), ... |
| 6 | 3kw3 | - | http://scripts.iucr.org/cgi-bin/paper?S2053230X14017725 | The structure of alanine racemase from Acinetobacter baumannii | 2014 | E Davis, E Scaletti-Hutchinson - Section F: Structural , 2014 - scripts.iucr.org | ... Alanine racemase, PDB entry, Whole monomer #, N-terminal domain +, C-terminal domain , Active site ##. Alr Eco, 2rjg, 1.30 (41%), 1.32 (40%), 1.02 (43%), 0.65 (60%). Alr Bhe, 3kw3, 1.86 (29%), 1.68 (25%), 1.07 (36%), 0.91 (48%). ... |
| 7 | 7jxc | 7jxe, 7jxd | https://www.sciencedirect.com/science/article/pii/S0092867421000805 | Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity | 2021 | EC Thomson, LE Rosen, JG Shepherd, R Spreafico- Cell, 2021 - Elsevier | / pdb /surface_glycoprotein/SARS-CoV-2/6m0j/isolde/notes.txt. The 1r42 refined structure differs from the PDB -deposited structure (copied from the 6m17 PDB structure ). ... Key resources table S2H13, S2H14, S2A4, S2X35 IgG Piccoli et al., 2020 PDB: 7JV2, 7JXC, 7JXD, 7JXE |
| 8 | 4q6u | - | https://www.sciencedirect.com/science/article/pii/S1369527421000102 | PAS domains in bacterial signal transduction | 2021 | EC Stuffle, MS Johnson, KJ Watts- Current Opinion in Microbiology, 2021 - Elsevier | ad) PAS monomer structures : (a) The PAS structural prototype photoactive dimer bound to heme cofactor (Fe 3+ , PDB : 4HI4, [25]) and a liganded monomer with cyanomet heme (Fe 3+ -CN, PDB : 3VOL, [31 For clarity, b-type heme is only shown bound to the liganded structure |
| 9 | 3lgj | - | https://www.nature.com/articles/s41598-017-15774-y | Structural Basis for DNA Recognition of a Single-stranded DNA-binding Protein from Enterobacter Phage Enc34 | 2017 | E Cernooka, J Rumnieks, K Tars, A Kazaks- Scientific reports, 2017 - nature.com | Structural homologs of the ORF6 protein were identified using the Dali server ... the number of superimposed atoms were ... 59 (PDB ID: 3LGJ) and 58 (PDB ID: 3VDY) |
| 10 | 3tcq | - | https://www.mdpi.com/1422-0067/24/7/6298 | Cheminformatics-Based Study Identifies Potential Ebola VP40 Inhibitors | 2023 | E Broni, C Ashley, J Adams, H Manu, E Aikins- International Journal of, 2023 - mdpi.com | Modeller generated five models using the 3D structures of 3TCQ and 7K5L as templates. structure of the VP40 with PDB ID 1ES6 as the parent template for modelling. 1ES6s structure |