We are actively tracking the number of publications by the scientific community which reference our structures, whether in the main text, figure captions or supplementary material. Selected articles are manually reviewed. Publications by SSGCID authors are excluded from the manually reviewed list. From our manual curation results, we estimate that the false positive rate might be as high as 50% for some structures.
This list was obtained from Google Scholar searches using an API provided by Christian Kreibich.
| Structure | Year released | #citations |
|---|---|---|
| 6WWD | 2020 | 0 |
| 6X9F | 2020 | 0 |
| 6X9N | 2020 | 0 |
| 7TM9 | 2022 | 0 |
| 5SCR | 2022 | 0 |
| 6XEP | 2020 | 0 |
| 6XR5 | 2020 | 0 |
| 7TM8 | 2022 | 0 |
| 7TM7 | 2022 | 0 |
| 7TM6 | 2022 | 0 |
| # | PDB | Additional SSGCID structures cited | Link | Title | Year | Citation | Highlighted abstract |
|---|---|---|---|---|---|---|---|
| 1 | 3tcq | - | http://scholar.google.com/https://bioinformation.net/012/97320630012192.pdf | Molecular docking based screening of compounds against VP40 from Ebola virus | 2016 | HMA El-Din, SA Loutfy, N Fathy, MH Elberry - , 2016 - bioinformation.net | ... Figure 1: A 3D structure cartoon representation of the matrix protein VP40 from Ebola virus ofSudan (PDB ID: 3TCQ) as viewed in JSmol (JavaScript). (http://www.rcsb.org) mention PDB IDused; Software used: Describe the salient features of the protein in 2 statements. ... |
| 2 | 4eqy | - | http://scholarcommons.usf.edu/etd/5614/ | Computer-Aided Structure-Based Drug Discovery: CXCL12, P. aeruginosa LpxA, and the Tiam1 PDZ Domain | 2014 | EW Smith - 2014 - scholarcommons.usf.edu | ... there seems to be some noticeable variation at the C-terminal end of the third α-helix, involving dissimilar tilts compared to bacterial orthologs A. baumannii (PDB ID: 4E6U), L. interrogans (PDB ID: 3HSQ), C. jejuni (PDB ID: 3ROS), B. thailandensis (PDB ID: 4EQY),... |
| 3 | 3qh4 | - | http://scholarbank.nus.edu/handle/10635/37588 | Characterization of Mycobacterial Estrases/Lipases using combined Biochemical and Computational Enzymology | 2012 | A SHUKLA - 2012 - scholarbank.nus.edu | ... Page 12. 3 Lists of Abbreviations THL: Tetrahydrolipstatin pNP: para-nitrophenol PDB: ProteinData Bank PMSF: phenylmethanesulfonylfluoride E600: diethyl-p-nitrophenylphosphate EC : Enzyme classifier TAGs: Triacylglycerol MTB: Mycobacterium tuberculosis ... |
| 4 | 2lwk | - | https://chemrxiv.org/ndownloader/files/25634519 | DrugPred_RNAStructure-based druggability predictions for RNA binding sites | 2020 | IH Rekand, R Brenk - 2020 - chemrxiv.org | However, the structure of the complex has been determined by NMR and it is possible that the resolution of the structure is not accurate enough to reveal the actual details of the binding mode.51 The Spinach Figure 6: Binder of influenza A promoter region ( PDB ID 2lwk ) |
| 5 | 3mmt | - | https://chemrxiv.org/ndownloader/files/24733793 | The Molecular Basis of Sulfosugar Selectivity in Sulfoglycolysis | 2020 | M Sharma, P Abayakoon, Y Jin, R Epa, JP Lingford - 2020 - chemrxiv.org | Figure S15. Closed conformations of PfkB, TPK and SF kinases indicate close structural rela- tionship EcYihVADPMgSF structure reveals KRN sulfonate recognition triad in YihV A, FBPA from Bartonella henselae forms homotetramers ( 3MMT . pdb ),{, 2011 #8494} FBPA from |
| 6 | 3oc6 | - | https://chemrxiv.org/ndownloader/files/23930861 | BioMetAll: Identifying Metal-Binding Sites in Proteins from Backbone Preorganization | 2020 | JE Snchez-Aparicio, L Tiessler-Sala - 2020 - chemrxiv.org | Only 6- phosphogluconolactonase from mycobacterium smegmatis (which structure is accessible at the PDB with the code 3oc6 ) with an of BioMetAll in an artificial metalloenzyme framework, we started by looking for the His-His- Asp/Glu motif in the 6-PGLac structure |
| 7 | 4hvt | - | https://chemrxiv.org/ndownloader/articles/7053812/versions/1/export_pdf | Pyrococcus furiosus Prolyl Oligopeptidase: A Dynamic Supramolecular Host for Peptidase and Dirhodium Catalysis | 2018 | K Ellis-Guardiola, H Rui, R Beckner, P Srivastava - 2018 - chemrxiv.org | both Pfu POP and the S447C mutant possess a two-domain architecture involving a peptidase domain reported homology model; M. xanthus chain A from 2BKL; R. typhi from 4HVT ; S. Scrofa from 1QFS; H. Page 17 S1). The structure of |
| 8 | 3qha | - | https://chemistry-europe.onlinelibrary.wiley.com/doi/abs/10.1002/cbic.201300321 | Structure and Activity of NADPH-Dependent Reductase Q1EQE0 from Streptomyces kanamyceticus, which Catalyses the R-Selective Reduction of an Imine Substrate | 2013 | M RodrguezMata, A Frank, E Wells, F Leipold- , 2013 - Wiley Online Library | ... 2. For structure solution, the highest sequence homologue in the Protein Data Bank was an ... to members of the gamma-hydroxybutyrate dehydrogenase (GHBDH) family such as PDB structures 3PEF ... These are 3QHA (from Mycobacterium avium 104) and 3L6D (from P. putida ... |
| 9 | 5umf | - | https://books.google.com/books?hl=en&lr=&id=XARADwAAQBAJ&oi=fnd&pg=PA97&dq=%225U... | Design of synthetic symmetrical proteins | 2017 | JRH Tameb, ARD Voet- Synthetic Biology: Volume 2, 2017 - books.google.com | assembly, Ribulose-phosphate structure but since exhibits alpha 3-epimerase, C and 2 PDB : 5UMF ) and 12-fold rotational symmetry (cartoon depiction; from left to right, PDB : 4YY2, 4YXX designs will without any doubt improve our understanding of protein structure and stability |
| 10 | 5kak | - | https://books.google.com/books?hl=en&lr=&id=x6RMDwAAQBAJ&oi=fnd&pg=PR8&dq=%225KA... | Protein-protein and domain-domain interactions | 2018 | P Kangueane, C Nilofer - 2018 - books.google.com | 1.10) structures It is important to under- stand the physical and chemical features of amino acids to understand protein folding, structure , function, and 1.4 A covalent bond is illustrated using cysteine with corresponding bond length 1.5 Structural Motifs Proteins are made of |